prot_H-paniculata_contig4797.11873.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4797.11873.1
Unique Nameprot_H-paniculata_contig4797.11873.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length334
Homology
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BLAST of mRNA_H-paniculata_contig4797.11873.1 vs. uniprot
Match: D8LSB8_ECTSI (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB8_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 8.580e-24
Identity = 106/275 (38.55%), Postives = 136/275 (49.45%), Query Frame = 0 
Query:   54 EVRMLAPAAQHTSLDSLRRRGRVPSFYTSRSIVNLSGLNVTDPSIVFE---HLHATDSTAAANGMPT------NGMNPALSSSRHQQPLFGSGSRLSTASEYSISEADERGDDVGLSMDGHLLRPPTP--TLTPXXXXXXXXXXEHRRPRKPYTPVGTPPQRRVDDTEASWREAGTGTFGIGLASSFQGAAGYPLVDGSEAVASGDEAAXXXXXXRAGGDGRVLTEDADLGWLTGSDLEALGLAPQETVVKSTSMAKFYYRRSQSMDASMNEMHQ 317
            +VRMLA A+QH S + LRR GRV SFYTSRS+VNLSGL+VTDPSIV E   H + + ST AA G  +      +G +  +  +  + PL                  DER D+   S +G+L  P      LTP           HR       P G   +R  ++  A+         G+G+ S+  GA   P    + A A  D AA          D        DLGWL+   L  +GLA +E VVKSTSMA FYYRRS+S++ASMNEM Q
Sbjct:  607 QVRMLA-ASQHPSSEQLRREGRVSSFYTSRSLVNLSGLSVTDPSIVMEQQPHQYPSSSTLAAIGNDSAILEEKDGDDGDVGLNYLEGPLL-----------------DERQDEPNRS-NGNLHGPGLGGGLLTPNGGTGGGTSLPHRGAEWRNQPEGG--RREHEEGAAN---------GLGIYSTLGGAELSPPPGRATAGADDDAAAAVWARQDERRD-----SGTDLGWLSLEQLAEMGLASREDVVKSTSMANFYYRRSKSLEASMNEMSQ 846
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4797.11873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSB8_ECTSI8.580e-2438.55PNPLA domain-containing protein n=2 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4797contigH-paniculata_contig4797:7485..11893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4797.11873.1mRNA_H-paniculata_contig4797.11873.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4797 7005..15176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4797.11873.1 ID=prot_H-paniculata_contig4797.11873.1|Name=mRNA_H-paniculata_contig4797.11873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp
MVQQLRHARHEYAPPAPSSFSSSLCVLCLAGARNWCTACRLFSFFSPAFF
FFFEVRMLAPAAQHTSLDSLRRRGRVPSFYTSRSIVNLSGLNVTDPSIVF
EHLHATDSTAAANGMPTNGMNPALSSSRHQQPLFGSGSRLSTASEYSISE
ADERGDDVGLSMDGHLLRPPTPTLTPPPPPPPPHHDEHRRPRKPYTPVGT
PPQRRVDDTEASWREAGTGTFGIGLASSFQGAAGYPLVDGSEAVASGDEA
AAAAAAARAGGDGRVLTEDADLGWLTGSDLEALGLAPQETVVKSTSMAKF
YYRRSQSMDASMNEMHQKSTSSGNLSTHSEPTL*
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