prot_H-paniculata_contig4698.11691.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4698.11691.1
Unique Nameprot_H-paniculata_contig4698.11691.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4698.11691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 60..77
e-value: 8.5E-5
score: 22.8
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 59..81
e-value: 1.8E-6
score: 25.5
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4698contigH-paniculata_contig4698:3439..6978 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4698.11691.1mRNA_H-paniculata_contig4698.11691.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4698 3439..6979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4698.11691.1 ID=prot_H-paniculata_contig4698.11691.1|Name=mRNA_H-paniculata_contig4698.11691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
LISTPSSYTEFRDNVALYGGAFHVGGVTLGGVANFVGNHAGQDGGALFVP
DGVFLAVGGDTTFSENTADGLGGAIYAASAANI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat