prot_H-paniculata_contig46911.11681.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE) HSP 1 Score: 222 bits (565), Expect = 4.080e-63 Identity = 120/247 (48.58%), Postives = 162/247 (65.59%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDK----------PVRSAVGRLIWLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCMTLSTSEAEYVAMAQGAKAALFTRAVL 236
+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +S P R A+G ++W+S +RPD++ AVRAVAR AH P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSV+G+A +GG+VVS S TQ ++LS++EAEY+A +G K ALF RAVL
Sbjct: 685 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMGEEWPAREAIGSMVWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVAGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVL 929
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5JZ67_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ67_9PHAE) HSP 1 Score: 187 bits (474), Expect = 3.430e-52 Identity = 109/235 (46.38%), Postives = 152/235 (64.68%), Query Frame = 0
Query: 3 GLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGRLIWLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCMTLSTSEAEYVAMAQGAKAALFTRAVL 236
GLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ V++DD++VAG C L A+L +F T GE + + GCA RD+ E + K ++A+ W+S +RPD++ AVRAV R AH RHW A+ K++SYLK+T+DLG+ ++R L ++VYV+A Y D + RSVSG+A +GG+VVS S TQ ++LS++EAEY+A +G K ALF RAVL
Sbjct: 274 GLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVVYLDDILVAGSDEDCKGLLASLNKKFPTKNLGECERFDGCAIERDV----ESTTLKISQTAI---TWVSTCSRPDVSFAVRAVERHAHALAKRHWDAIRKVLSYLKETRDLGITYQRRSGLGMAVYVNASYVDTED-NRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAGGEGVKEALFVRAVL 499
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5KFN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN5_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.230e-51 Identity = 103/229 (44.98%), Postives = 144/229 (62.88%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTRGELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGRLIWLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCMTLSTSEAEYVAMAQGAKAA 229
+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ + + + G R DE+ + PVR A+G ++W+S +RPD++ AVRAVAR AH P R+W A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSVSG+A +GG+V+S S TQ ++LS++EAEY+A G K A
Sbjct: 185 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEECQCMVERFDVKSTSRIPATPGADLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRNWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVLSHGSKTQSIVSLSSTEAEYIAAEDGVKEA 409
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5KLY3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY3_9PHAE) HSP 1 Score: 177 bits (450), Expect = 9.870e-51 Identity = 106/238 (44.54%), Postives = 147/238 (61.76%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTRGELKWYLGCAFWRDI--VRGDEDLSDKPVRSAVGRLIWLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCMTLSTSEAEYVAMAQGAKAALFTRAVL 236
+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG R + Q+T ++ D+ R +E + PVR A+G ++W+S +RPD++ AV AV R AH P RHW A+ KI+ YL T+ LG+ ++RG L L+VYVDA YAD + RRSVSG+A +GG+VVS S Q ++L ++EAEY+A +G K ALF RAVL
Sbjct: 52 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGM---------VRRFDVQSTS-----HIPATPGADLGPKRDNEKGGEWPVREAIGSMVWVSTFSRPDVSFAVPAVVRHAHAPAKRHWDAIQKILGYLTGTRYLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKMQTIVSLYSTEAEYIAAGEGVKEALFVRAVL 273
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5KTI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI8_9PHAE) HSP 1 Score: 170 bits (431), Expect = 3.310e-49 Identity = 100/211 (47.39%), Postives = 140/211 (66.35%), Query Frame = 0
Query: 39 KNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQT---------TRGELKWY--LGCAFWRDI--VRGDEDLSDKPVRSAVGRLIWLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCMTLSTSEAEYVAMAQGAKAALFTRAVL 236
K+ VV MI+ ++VDD++VAG C L ++ F T R +++ + + DI R DE + PVR A+G ++W+S +RPDI+ AVRAVAR AH P +RHWKA+VKI++YLK+T+DLG+ +ERG L L+VYVDA YAD + RRSVSG+A +GG+V+S S TQ ++LS++EAEY+A +G K ALF RAVL
Sbjct: 2 KDDVVVMIIVIYVDDILVAGSDDDCKELLDSINKAFPTKDLGECVIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVL 211
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5KQ05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ05_9PHAE) HSP 1 Score: 175 bits (443), Expect = 2.740e-48 Identity = 105/253 (41.50%), Postives = 148/253 (58.50%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIV----------------RGDEDLSDKPVRSAVGRLIWLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCMTLSTSEAEYVAMAQGAKAALFTRAVL 236
+YGLKQ+GR W LV + Q K+DPCVFR + VV MI+ +++DD++VAG C+ L A+L T GE +W+ G D+ +GDE PVR A+G ++W+S +RPD++ AVRA W A+ KI+ Y K T+DLG+ ++RG L L+VYVDA YAD + RRSVSG+A +GG+V+S S TQ +++S++EAEY+A +G K ALF RAVL
Sbjct: 176 IYGLKQSGRQWGYHAAGTLVES-RFEQCKADPCVFRKMVDEVVVMIIVIYLDDILVAGSDEDCEELLASLNKTNPTNSLGECEWFDGMVRRFDVQSTSRIPASPGADLGPKQGDEKGGQWPVREAIGSMMWVSTFSRPDVSFAVRA------------WDAIQKIVGYSKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVISHGSNTQSIVSVSSTEAEYIAAGEGVKEALFVRAVL 414
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.930e-47 Identity = 112/274 (40.88%), Postives = 147/274 (53.65%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLS--------------------------------------DKPVRSAVGRLIWLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERGR--DLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCMTLSTSEAEYVAMAQGAKAALFTR 233
+YGLKQA R W K LV + +G Q +D CV RL + GVV M++ VHVDD+ GK +C+ L T GEL+ Y G F RD +G LS ++P RS VG L+WL+ TRPDI +AVRAVAR ++ P HWKA + ++ Y++ T+ G+ +RG ++L VYVD+DYA K+ RRSVSG VM GS VS S TQ +TLS++EAEY AMA G K A+F R
Sbjct: 751 LYGLKQASRTWHKHLVRGM-KCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLSQQTYATNMVAKFGVTRNKETPMAVGVKLEEFDACEPDVEEPFRSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLR 1023
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5KGA6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA6_9PHAE) HSP 1 Score: 168 bits (426), Expect = 6.700e-47 Identity = 109/277 (39.35%), Postives = 147/277 (53.07%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRG--------------------------------------DEDLSDKPVRSAVGRLIWLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERGR--DLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCMTLSTSEAEYVAMAQGAKAALFTRAVL 236
+YGL+QA R++ KRLV L +G QS SDPCV R V ++ +HVDD++ G + AL T GE++++LGCAF RD G DE D P R VG L+W++ TRPDI++AVRAVAR +H P H KA KI++YL + L L +++ D+ VYVDAD+A K+ RRSVSG V++ +V+ S TQ C+TLST+EAEYVAM G K ALF + +L
Sbjct: 12 LYGLRQASRIFHKRLVSDL-KRIGFEQSLSDPCVLRFMMGDEVLGMIAIHVDDILYEGIERLAKMVVEALGDSLPTKNLGEIRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYKSVMEDEGARDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHGKAAQKILNYLLEAAHLTLKYKQDTMVDVGTLVYVDADFASKATDRRSVSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGML 287
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5K1X1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X1_9PHAE) HSP 1 Score: 169 bits (429), Expect = 8.690e-47 Identity = 106/243 (43.62%), Postives = 139/243 (57.20%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRG----------------DEDLSDKPVRSAVGRLI-WLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERG--RDLNLSVYVDAD---YADKSNWRRSVSGVAVMLGGSVVSATSTTQHCMTLSTSEAEYV 220
+YGLKQA R W L L+ +G+ Q +D CVFRL + G V MI+ VHVDD+ AG+ +CD L GEL+WY C + RD+ RG +E +D P R VG L+ WL+ TRPDIA+AVRAVAR +P HW A + I+ Y+++T +G+ FERG +++ V+VDAD Y RRSVSG VM GG V+ S TQ C+TLST+EAEYV
Sbjct: 75 LYGLKQASRHWHAHLTRCLLL-LGLLQCLADACVFRLMEEGNVVMIIVVHVDDIFAAGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYERDVERGLLKISQQSVKLSDFDVNEASADVPFRELVGSLMMWLATQTRPDIANAVRAVARYCASPKMVHWTAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADNAVYCSVVPXRRSVSGGLVMCGGGSVTWFSRTQKCVTLSTTEAEYV 316
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Match: A0A6H5K5V9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5V9_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.760e-46 Identity = 103/248 (41.53%), Postives = 141/248 (56.85%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVF-RLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGRLIWLSGMTRPDIASAVRAVARAAHNPTDRHWKAVVKIISYLKKTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLG----------GSVVSATSTTQHCMTLSTSEAEYVAMAQGAKAALFTRAVL 236
+YGLKQ+GR W + V N G Q K+DP VF + VV +I+ ++VDD++V G C+ L A+L +F T GE W R DE+ R A+G ++W+S +RPD++ AVRAVAR AH P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + R + G G+V S S TQ ++LS++EAEY+A +G ALF RAVL
Sbjct: 52 IYGLKQSGRQWGYHAADTPVEN-GFEQCKADPFVFPNMVDEVVVMIIIVIYVDDILVVGSDEDCEELLASLNKKFPTKNLGE---------WPK--REDEERXXXXXREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSATVGXXXXXXXXXXXXXXXXGTVASHGSKTQSIVSLSSTEAEYIAAGEGVNEALFVRAVL 287 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46911.11681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig46911.11681.1 ID=prot_H-paniculata_contig46911.11681.1|Name=mRNA_H-paniculata_contig46911.11681.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bpback to top |