prot_H-paniculata_contig46896.11677.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46896.11677.1
Unique Nameprot_H-paniculata_contig46896.11677.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: D7FYX1_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX1_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.590e-21
Identity = 42/51 (82.35%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    3 QGGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            QGGGFQA+ GGDAFDVLLK F  RMECFASPFNCRY  YCSAF DTD PFG
Sbjct:  281 QGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFG 331          
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: A0A7S2V310_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V310_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.330e-19
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 TNQGGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            T QGGGFQAA  G  FDVLL+HF+VRME FASPFN RY  +CSAFRDTD+ FG
Sbjct:   59 TLQGGGFQAALPGPCFDVLLRHFDVRMELFASPFNSRYSRFCSAFRDTDSVFG 111          
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: A0A6H5LQ06_9PHAE (PCIF1_WW domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ06_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 5.240e-18
Identity = 37/46 (80.43%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    8 QAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            QA+ GGDAFDVLLK F  RMECFASPFNCRY  YCSAF DTD PFG
Sbjct:  363 QASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFG 408          
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: A0A6G0WGH7_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGH7_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.480e-18
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    4 GGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            GGGFQAA   D F+VLL+HF+ RMECFASPFNCRYG +CSAF DTD  FG
Sbjct:  244 GGGFQAALNEDCFNVLLEHFDCRMECFASPFNCRYGHFCSAFLDTDMAFG 293          
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: A0A5D6Y1C5_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1C5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.820e-17
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    4 GGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            GGGFQAA   + FDVLL+HF+  MECFASP NCRYG +CSAF DTD PFG
Sbjct:  903 GGGFQAALNEECFDVLLRHFDCAMECFASPLNCRYGRFCSAFPDTDEPFG 952          
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: A0A485L2N9_9STRA (Aste57867_14883 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2N9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.990e-17
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    4 GGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            GGGFQAA   + FDVLL HF+ +MECFASPFNCRYG +CSAF DTD  FG
Sbjct:  242 GGGFQAALNEECFDVLLTHFDAKMECFASPFNCRYGRFCSAFLDTDMVFG 291          
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: A0A835YQ92_9STRA (Phosphorylated CTD interacting factor 1 WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ92_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.210e-16
Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    4 GGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            GGGFQAAA GD FDVLL+ F   MECFASP N RY  +C+AF DTDAPFG
Sbjct:  275 GGGFQAAAPGDVFDVLLRRFGADMECFASPLNARYARHCTAFPDTDAPFG 324          
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: A0A4D9CX42_9STRA (PCIF1_WW domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX42_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 5.620e-16
Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 TNQGGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            T++GGGFQ A   +AFDVL +H + RMECFASP NC Y  YCSAF+DTDA FG
Sbjct:  297 TDRGGGFQGAIHEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFG 349          
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: W4GG66_9STRA (PCIF1_WW domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GG66_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.170e-16
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    4 GGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            GGGFQAA   + FDVLL+HF+  MECFASPFN RYG +CSAF DTD  FG
Sbjct:  247 GGGFQAALNEECFDVLLRHFDCNMECFASPFNSRYGRFCSAFLDTDRVFG 296          
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Match: A0A024TWC3_9STRA (PCIF1_WW domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWC3_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 9.900e-16
Identity = 35/50 (70.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    4 GGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDAPFG 53
            GGGFQAA   + FDVLL+HF   MECFASPFN RYG +CSAF DTD  FG
Sbjct:  252 GGGFQAALNEECFDVLLRHFKCNMECFASPFNSRYGRFCSAFLDTDRVFG 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46896.11677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYX1_ECTSI1.590e-2182.35PCIF1_WW domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2V310_9STRA2.330e-1973.58Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6H5LQ06_9PHAE5.240e-1880.43PCIF1_WW domain-containing protein n=2 Tax=Ectocar... [more]
A0A6G0WGH7_9STRA8.480e-1874.00PCIF1_WW domain-containing protein n=1 Tax=Aphanom... [more]
A0A5D6Y1C5_9STRA1.820e-1772.00Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A485L2N9_9STRA2.990e-1772.00Aste57867_14883 protein n=1 Tax=Aphanomyces stella... [more]
A0A835YQ92_9STRA2.210e-1672.00Phosphorylated CTD interacting factor 1 WW domain-... [more]
A0A4D9CX42_9STRA5.620e-1666.04PCIF1_WW domain-containing protein n=2 Tax=Monodop... [more]
W4GG66_9STRA7.170e-1670.00PCIF1_WW domain-containing protein n=6 Tax=Aphanom... [more]
A0A024TWC3_9STRA9.900e-1670.00PCIF1_WW domain-containing protein n=2 Tax=Aphanom... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022035PCIF1, WW domainPFAMPF12237PCIF1_WWcoord: 4..53
e-value: 1.2E-20
score: 73.8
NoneNo IPR availablePANTHERPTHR21727:SF0PHOSPHORYLATED CTD-INTERACTING FACTOR 1coord: 2..53
IPR039881mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase PCIF1-likePANTHERPTHR21727PHOSPHORYLATED CTD INTERACTING FACTOR 1coord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46896contigH-paniculata_contig46896:384..542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46896.11677.1mRNA_H-paniculata_contig46896.11677.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46896 384..542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46896.11677.1 ID=prot_H-paniculata_contig46896.11677.1|Name=mRNA_H-paniculata_contig46896.11677.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
TNQGGGFQAAAGGDAFDVLLKHFNVRMECFASPFNCRYGSYCSAFRDTDA
PFG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022035PCIF1_WW
IPR039881PCIF1-like