prot_H-paniculata_contig46887.11675.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46887.11675.1
Unique Nameprot_H-paniculata_contig46887.11675.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length78
Homology
[Close]
BLAST of mRNA_H-paniculata_contig46887.11675.1 vs. uniprot
Match: A0A6H5JXN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN7_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 2.370e-5
Identity = 23/68 (33.82%), Postives = 39/68 (57.35%), Query Frame = 0 
Query:   11 DFMLCDICTQWSQLRHGAPGVRPTQNSMALAKIEKDYIKHLRLVKADRQVIEDNTRKSIIVQGDNKPL 78
            DFM C  CT+ ++  HGAPG+RP Q++   A+I +   +H  +V  DR+++  +   +   Q +  PL
Sbjct:   51 DFMKCSDCTEINEKLHGAPGIRPIQDTRQRAEIVRHQKEHHHIVSKDRELLTSHMEAAKREQANGTPL 118
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46887.11675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JXN7_9PHAE2.370e-533.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46887contigH-paniculata_contig46887:260..668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46887.11675.1mRNA_H-paniculata_contig46887.11675.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46887 252..668 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46887.11675.1 ID=prot_H-paniculata_contig46887.11675.1|Name=mRNA_H-paniculata_contig46887.11675.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
MGHVLIGVGLDFMLCDICTQWSQLRHGAPGVRPTQNSMALAKIEKDYIKH
LRLVKADRQVIEDNTRKSIIVQGDNKPL
back to top