prot_H-paniculata_contig4684.11664.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4684.11664.1
Unique Nameprot_H-paniculata_contig4684.11664.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
BLAST of mRNA_H-paniculata_contig4684.11664.1 vs. uniprot
Match: A0A6H5L892_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L892_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 3.320e-25
Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 MGYGGLRDSLALELDHKYNPGDGSNDIVYDHIGIHSAGRGSNTSALSSSELAPPRVWDVADG 62
            MGYGGLRDSLA+ELDH+YNPG  S D+VYDH+G+HS G G + SAL+S+ELAPP  WD+ADG
Sbjct:  120 MGYGGLRDSLAVELDHRYNPGADSGDLVYDHVGVHSGGPGGDNSALASTELAPPVAWDLADG 181          
BLAST of mRNA_H-paniculata_contig4684.11664.1 vs. uniprot
Match: D8LHX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX6_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 4.180e-24
Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 MGYGGLRDSLALELDHKYNPGDGSNDIVYDHIGIHSAGRGSNTSALSSSELAPPRVWDVADG 62
            MGYGGLRDSLA+ELDH+YNPG  S D+VYDH+G+HS G G + SAL+S+ELAPP  WD+ADG
Sbjct:  128 MGYGGLRDSLAVELDHRYNPGADSGDLVYDHVGVHSGGPGGDNSALTSAELAPPVAWDLADG 189          
BLAST of mRNA_H-paniculata_contig4684.11664.1 vs. uniprot
Match: A0A6S9H5Z4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H5Z4_HETAK)

HSP 1 Score: 68.9 bits (167), Expect = 3.700e-12
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    1 MGYGGLRDSLALELDHKYNPGDGSNDIVYDHIGIHSAGRGSN--TSALSSSELAPPRVWDVADG 62
            +GYGG+++SLA+E D  YNP   S+D++YDH+ IH+ G G N    A + +E+A PR  DV DG
Sbjct:  201 LGYGGIKNSLAVEFDTWYNPESNSSDLIYDHVSIHAGGSGENMENDAWARTEIASPRQHDVGDG 264          
BLAST of mRNA_H-paniculata_contig4684.11664.1 vs. uniprot
Match: A0A7S2LKQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LKQ9_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 5.440e-5
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    1 MGYGGLRDSLALELD--------HKYNPGDGSNDIVYDHIGIHSAGRGSNTSALSSSELAPPRVWDVADG 62
            +GYGGL++S+A+E D         +Y      +D+ +DH+ IHSAG G+N S  S+S L   R  D+ADG
Sbjct:  199 LGYGGLKNSIAVEFDTWTNTQVTEEYK----EDDLFHDHVSIHSAGIGTNDSGESTS-LGYSRPVDLADG 263          
BLAST of mRNA_H-paniculata_contig4684.11664.1 vs. uniprot
Match: A0A7S2LMN1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LMN1_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 5.890e-5
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    1 MGYGGLRDSLALELD--------HKYNPGDGSNDIVYDHIGIHSAGRGSNTSALSSSELAPPRVWDVADG 62
            +GYGGL++S+A+E D         +Y      +D+ +DH+ IHSAG G+N S  S+S L   R  D+ADG
Sbjct:  199 LGYGGLKNSIAVEFDTWTNTQVTEEYK----EDDLFHDHVSIHSAGIGTNDSGESTS-LGYSRPVDLADG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4684.11664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L892_9PHAE3.320e-2570.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHX6_ECTSI4.180e-2470.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6S9H5Z4_HETAK3.700e-1248.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2LKQ9_9STRA5.440e-541.43Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2LMN1_9STRA5.890e-541.43Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4684contigH-paniculata_contig4684:3697..5094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4684.11664.1mRNA_H-paniculata_contig4684.11664.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4684 3680..5094 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4684.11664.1 ID=prot_H-paniculata_contig4684.11664.1|Name=mRNA_H-paniculata_contig4684.11664.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
MGYGGLRDSLALELDHKYNPGDGSNDIVYDHIGIHSAGRGSNTSALSSSE
LAPPRVWDVADG
back to top