prot_H-paniculata_contig46815.11659.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46815.11659.1
Unique Nameprot_H-paniculata_contig46815.11659.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length155
Homology
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BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: A0A1L2F1V5_9PHAE (Photosystem I assembly protein Ycf3 n=58 Tax=Phaeophyceae TaxID=2870 RepID=A0A1L2F1V5_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 2.020e-63
Identity = 133/155 (85.81%), Postives = 143/155 (92.26%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            MSRSQRNDNFIDKTFTI+AD+ILK+FPA+KEEK+AFFYY+DGMSAQSEGEYAEALENYYEALQLEEDPYDRS XXXXXXXXXXXXXXXXXXXXXXXXXXXXN NLPQALNNIA      VIYHYQGVKASE QN D+AK+ F++AAEYW QAINL
Sbjct:    1 MSRSQRNDNFIDKTFTIVADIILKVFPASKEEKEAFFYYKDGMSAQSEGEYAEALENYYEALQLEEDPYDRSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQNLPQALNNIA------VIYHYQGVKASEKQNIDVAKLLFNKAAEYWKQAINL 149
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BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: B2XT84_HETAK (Photosystem I assembly protein Ycf3 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT84_HETAK)

HSP 1 Score: 191 bits (486), Expect = 9.610e-60
Identity = 123/155 (79.35%), Postives = 138/155 (89.03%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            M RSQRNDNFIDKTFT++AD++LK+FPA+KEEK+AFFYYRDGMSAQSEGEYAEALENYYEALQ+EEDPYDR   XXXXXXXXXXXXXXXXXXXXXXXXX  NSNLPQALNNIA      VIYHYQG+KA++ QN ++A+ FFD+AAEYW QAI L
Sbjct:    1 MGRSQRNDNFIDKTFTVMADILLKVFPASKEEKEAFFYYRDGMSAQSEGEYAEALENYYEALQIEEDPYDRGFIXXXXXXXXXXXXXXXXXXXXXXXXXALNSNLPQALNNIA------VIYHYQGMKATKKQNVEVAREFFDKAAEYWKQAITL 149
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BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: A0A023HBL3_9STRA (Photosystem I assembly protein Ycf3 n=10 Tax=Ochrophyta TaxID=2696291 RepID=A0A023HBL3_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.150e-59
Identity = 126/155 (81.29%), Postives = 136/155 (87.74%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            M RSQRNDNFIDKTFTI+AD++LK+ PA+K+EKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRS   XXXXXXXXXXXXXXXXXXXXXXXXX N NLPQALNNIA      VIYHYQGVKAS+ +N +IAK  FD+AAEYW QAI L
Sbjct:    1 MGRSQRNDNFIDKTFTIVADILLKILPASKQEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSYILXXXXXXXXXXXXXXXXXXXXXXXXXLNLNLPQALNNIA------VIYHYQGVKASKKKNLEIAKGLFDKAAEYWKQAIKL 149
[Close]
BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: A0A7S6U9V8_9STRA (Photosystem I assembly protein Ycf3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9V8_9STRA)

HSP 1 Score: 189 bits (481), Expect = 4.860e-59
Identity = 125/155 (80.65%), Postives = 140/155 (90.32%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            M+RSQ+NDNFIDKTFT++AD++LK+FPA+KEEK+AFFYYRDGMSAQSEGEYAEALENYYEALQ+EEDP DRSXXXXXXXXXXXXXXXXXXXXXXXXXXX  N+NLPQALNNIA      VIYHYQG+KASE QN DIAKI F +A++YW QAI L
Sbjct:    1 MARSQKNDNFIDKTFTVMADILLKVFPASKEEKEAFFYYRDGMSAQSEGEYAEALENYYEALQIEEDPKDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXELNTNLPQALNNIA------VIYHYQGIKASEKQNIDIAKILFSRASQYWKQAITL 149
[Close]
BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: A0A516ZA68_9STRA (Photosystem I assembly protein Ycf3 n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZA68_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.630e-58
Identity = 123/155 (79.35%), Postives = 136/155 (87.74%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            M R Q+NDNFIDKTFTIIAD++LK+FPA+K+EKQAFFYYR+GMSAQSEGEYAEALENYYEALQ+EEDPYDRS   XXXXXXXXXXXXXXXXXXXXXXXXX NSNLPQALNNIA      VIYHYQG+KASE +N ++AK  FD+A EYW QAI L
Sbjct:    1 MGRIQKNDNFIDKTFTIIADILLKVFPASKQEKQAFFYYREGMSAQSEGEYAEALENYYEALQIEEDPYDRSYILXXXXXXXXXXXXXXXXXXXXXXXXXLNSNLPQALNNIA------VIYHYQGIKASEVENLEVAKTLFDKAGEYWQQAIKL 149
[Close]
BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: J9QSV9_9STRA (Photosystem I assembly protein Ycf3 n=3 Tax=Pelagomonadales TaxID=54409 RepID=J9QSV9_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.890e-57
Identity = 121/155 (78.06%), Postives = 135/155 (87.10%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            M RSQRNDNFIDKTFT++AD++LK+FPA+K+EKQAFFYYRDGMSAQ+EG+YAEALENYYEALQ+EEDPYDRS   XXXXXXXXXXXXXXXXXXXXXXXXX NSNLPQALNNIA      VIYHYQG +A E QNT+ +K  FD+A EYW QAI L
Sbjct:    1 MGRSQRNDNFIDKTFTLLADILLKVFPASKQEKQAFFYYRDGMSAQAEGDYAEALENYYEALQIEEDPYDRSYILXXXXXXXXXXXXXXXXXXXXXXXXXLNSNLPQALNNIA------VIYHYQGSQAIEKQNTETSKALFDKAGEYWRQAIRL 149
[Close]
BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: A0A2U9NLZ0_9STRA (Photosystem I assembly protein Ycf3 n=1 Tax=Proboscia sp. TaxID=1923967 RepID=A0A2U9NLZ0_9STRA)

HSP 1 Score: 184 bits (467), Expect = 8.430e-57
Identity = 125/155 (80.65%), Postives = 137/155 (88.39%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            MSR QRNDNFIDKTF+I+AD++LKL PA+  EKQAFFYYRDGMSAQSEGEYAEALE+YYEALQLEEDP+DRS XXXXXXXXXXXXXXXXXXXXXXXXXXX N NLPQALNNIA      VIYHYQGVKAS+ QN ++AK  FD+AAEYW+QAI L
Sbjct:    1 MSRGQRNDNFIDKTFSIVADILLKLLPASMREKQAFFYYRDGMSAQSEGEYAEALEDYYEALQLEEDPFDRSFXXXXXXXXXXXXXXXXXXXXXXXXXXXLNFNLPQALNNIA------VIYHYQGVKASKKQNLEVAKGLFDKAAEYWHQAIQL 149
[Close]
BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: B7T1Q9_VAULI (Photosystem I assembly protein Ycf3 n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1Q9_VAULI)

HSP 1 Score: 183 bits (464), Expect = 2.260e-56
Identity = 122/155 (78.71%), Postives = 139/155 (89.68%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            M + QRNDNFIDKTFTI+AD++LK+FPA+KEEKQAFFYY+DGMSAQS+GEYAEALE+YYEALQ+EEDPYDRS XXXXXXXXXXXXXXXXXXXXXXXXXXX NS+L QALNNIA      VIYHYQG+KA E QN ++A++ FD+AAEYW QAINL
Sbjct:    1 MVKIQRNDNFIDKTFTIMADILLKVFPASKEEKQAFFYYKDGMSAQSDGEYAEALEDYYEALQMEEDPYDRSFXXXXXXXXXXXXXXXXXXXXXXXXXXXLNSSLMQALNNIA------VIYHYQGIKAFEKQNLEVAQLLFDKAAEYWKQAINL 149
[Close]
BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: A0A1C9CEI6_9RHOD (Photosystem I assembly protein Ycf3 n=4 Tax=Compsopogonophyceae TaxID=930023 RepID=A0A1C9CEI6_9RHOD)

HSP 1 Score: 182 bits (461), Expect = 5.510e-56
Identity = 119/155 (76.77%), Postives = 133/155 (85.81%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            M+RSQRNDNFIDKTFTI+AD++LK  PA+KEEK+AF YY+DGMSAQSEGEYAEALENYYEAL+LEEDPYDRS   XXXXXXXXXXXXXXXXXXXXXXXXX N+ LPQALNNIA      VIYHYQG+KA+E  NT+I K  FD+A EYW QA+ L
Sbjct:    1 MARSQRNDNFIDKTFTILADILLKFLPASKEEKEAFAYYKDGMSAQSEGEYAEALENYYEALKLEEDPYDRSYILXXXXXXXXXXXXXXXXXXXXXXXXXLNARLPQALNNIA------VIYHYQGIKAAEQSNTEITKTMFDKAGEYWRQAVRL 149
[Close]
BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Match: A0A1C9CCZ3_9RHOD (Photosystem I assembly protein Ycf3 n=8 Tax=Rhodophyta TaxID=2763 RepID=A0A1C9CCZ3_9RHOD)

HSP 1 Score: 181 bits (460), Expect = 8.070e-56
Identity = 116/155 (74.84%), Postives = 130/155 (83.87%), Query Frame = 0 
Query:    1 MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGEYAEALENYYEALQLEEDPYDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWNQAINL 155
            M RSQRNDNFIDKTFT++AD++LK+ PA+KEEK+AF YYRDGMSAQ+EGEYAEALENYYEAL+LEEDPYDRS      XXXXXXXXXXXXXXXXXXXXXX NS LPQALNNIA      VIYHYQG+KAS   N + AKI FD+AA+YW QA+ L
Sbjct:    1 MPRSQRNDNFIDKTFTVLADIVLKILPASKEEKEAFSYYRDGMSAQTEGEYAEALENYYEALRLEEDPYDRSYILYNIXXXXXXXXXXXXXXXXXXXXXXLNSKLPQALNNIA------VIYHYQGIKASRKNNFETAKIMFDKAADYWKQAVQL 149
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46815.11659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1L2F1V5_9PHAE2.020e-6385.81Photosystem I assembly protein Ycf3 n=58 Tax=Phaeo... [more]
B2XT84_HETAK9.610e-6079.35Photosystem I assembly protein Ycf3 n=2 Tax=Hetero... [more]
A0A023HBL3_9STRA4.150e-5981.29Photosystem I assembly protein Ycf3 n=10 Tax=Ochro... [more]
A0A7S6U9V8_9STRA4.860e-5980.65Photosystem I assembly protein Ycf3 n=1 Tax=Schizo... [more]
A0A516ZA68_9STRA1.630e-5879.35Photosystem I assembly protein Ycf3 n=3 Tax=Dictyo... [more]
J9QSV9_9STRA1.890e-5778.06Photosystem I assembly protein Ycf3 n=3 Tax=Pelago... [more]
A0A2U9NLZ0_9STRA8.430e-5780.65Photosystem I assembly protein Ycf3 n=1 Tax=Probos... [more]
B7T1Q9_VAULI2.260e-5678.71Photosystem I assembly protein Ycf3 n=1 Tax=Vauche... [more]
A0A1C9CEI6_9RHOD5.510e-5676.77Photosystem I assembly protein Ycf3 n=4 Tax=Compso... [more]
A0A1C9CCZ3_9RHOD8.070e-5674.84Photosystem I assembly protein Ycf3 n=8 Tax=Rhodop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 35..68
e-value: 0.012
score: 24.8
coord: 119..152
e-value: 430.0
score: 0.6
coord: 72..105
e-value: 2.4E-6
score: 37.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 72..105
score: 11.446
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 35..68
score: 9.853
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 74..104
e-value: 2.3E-9
score: 36.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..155
e-value: 2.8E-19
score: 71.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 32..155
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 43..155
NoneNo IPR availablePANTHERPTHR26312:SF124coord: 43..155
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 35..105
score: 18.49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46815contigH-paniculata_contig46815:992..1491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46815.11659.1mRNA_H-paniculata_contig46815.11659.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46815 992..1491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46815.11659.1 ID=prot_H-paniculata_contig46815.11659.1|Name=mRNA_H-paniculata_contig46815.11659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
MSRSQRNDNFIDKTFTIIADLILKLFPANKEEKQAFFYYRDGMSAQSEGE
YAEALENYYEALQLEEDPYDRSFILYNIGLIFSSNGDYLKALEYYHQALE
LNSNLPQALNNIAALNNIAVIYHYQGVKASENQNTDIAKIFFDQAAEYWN
QAINL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR001440TPR_1
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom