prot_H-paniculata_contig46797.11651.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46797.11651.1
Unique Nameprot_H-paniculata_contig46797.11651.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length91
Homology
BLAST of mRNA_H-paniculata_contig46797.11651.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 3.360e-14
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   25 PCSSNASREWVVNDAASAMALTAAVNCSGGVFHVEWTGNIVVEQEIYVAGGTSLHVAGSGAQAGMEG 91
            PCS+   + WVV D+A A+AL AAVNCSGG F VEW G++VVE  IYV  GT + V G G+ A ++G
Sbjct:   38 PCSAEVQQSWVVADSAEALALAAAVNCSGGSFEVEWRGSVVVESPIYVRDGTIVTVTGVGSTAVIDG 104          
BLAST of mRNA_H-paniculata_contig46797.11651.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 4.070e-13
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0
Query:   23 AAPCSSNASREWVVNDAASAMALTAAVNCSGGVFHVEWTGNIVVEQEIYVAGGTSLHVAGSGAQAGMEG 91
            A PC+++A + WVV  +  A AL AAVNCSGG+F VEW G +VV Q  YV  GT L ++G+ + A +EG
Sbjct:  130 ALPCTADAQQTWVVESSTQAQALAAAVNCSGGLFEVEWRGRVVVGQPFYVVDGTVLTISGADSSAVVEG 198          
BLAST of mRNA_H-paniculata_contig46797.11651.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.620e-12
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0
Query:   23 AAPCSSNASREWVVNDAASAMALTAAVNCSGGVFHVEWTGNIVVEQEIYVAGGTSLHVAGSGAQAGMEG 91
            A PC+++A + WVV  +A A AL AAVNCSGG+F VEW G +VV +   V  GT L V+G+ + A +EG
Sbjct:  189 ALPCTADAQQTWVVESSAQAQALAAAVNCSGGLFEVEWRGRVVVGEPFNVVDGTVLTVSGADSSAVVEG 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46797.11651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTL7_ECTSI3.360e-1455.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G2X5_ECTSI4.070e-1350.72Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K7Z1_9PHAE3.620e-1250.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.899
NoneNo IPR availableTMHMMTMhelixcoord: 39..58
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46797contigH-paniculata_contig46797:1178..1450 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46797.11651.1mRNA_H-paniculata_contig46797.11651.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46797 1170..1450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46797.11651.1 ID=prot_H-paniculata_contig46797.11651.1|Name=mRNA_H-paniculata_contig46797.11651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
MTGRSSWIIVIILVVISYTGIVAAPCSSNASREWVVNDAASAMALTAAVN
CSGGVFHVEWTGNIVVEQEIYVAGGTSLHVAGSGAQAGMEG
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