prot_H-paniculata_contig46729.11644.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46729.11644.1
Unique Nameprot_H-paniculata_contig46729.11644.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
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BLAST of mRNA_H-paniculata_contig46729.11644.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.360e-8
Identity = 32/91 (35.16%), Postives = 50/91 (54.95%), Query Frame = 0 
Query:    9 GHVAWTALGEKYLNSSMQRGRLLMRQLDSKVMAPNQDPDEYLTEIFHLRDELEYIGEPFSEGRIMDIILEGLTDDYDQIKFAAERDLDFSL 99
            G   W  L  K+  +   R R L R+L+S  M    DPD ++T ++HL ++L +IG   ++ ++ DIIL+GL  +Y  I  A+   LD  L
Sbjct:  232 GLAVWKELESKFQPADEHRRRNLERELESATMRTGTDPDIFITHVWHLAEQLRFIGGTVTDEKLGDIILQGLPAEYHLISGASGHYLDSEL 322
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46729.11644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KY84_9PHAE3.360e-835.16Integrase catalytic domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 10..93
e-value: 3.9E-12
score: 46.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46729contigH-paniculata_contig46729:838..1143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46729.11644.1mRNA_H-paniculata_contig46729.11644.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46729 838..1143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46729.11644.1 ID=prot_H-paniculata_contig46729.11644.1|Name=mRNA_H-paniculata_contig46729.11644.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
PEAGQLPDGHVAWTALGEKYLNSSMQRGRLLMRQLDSKVMAPNQDPDEYL
TEIFHLRDELEYIGEPFSEGRIMDIILEGLTDDYDQIKFAAERDLDFSLK
DM
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