prot_H-paniculata_contig4670.11637.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4670.11637.1
Unique Nameprot_H-paniculata_contig4670.11637.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
BLAST of mRNA_H-paniculata_contig4670.11637.1 vs. uniprot
Match: D8LH38_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH38_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 7.700e-29
Identity = 71/176 (40.34%), Postives = 90/176 (51.14%), Query Frame = 0
Query:    1 MSQNGRIGRFCSEHRKPEVIVTTSETTCQYEGCTNEPRYGARKGPLSFCSDHKRVGMYTNRNGQLMVATRDGSAFQLRRQFRQKVEAVQG-----TTISDAVIVPETKVENVGVRSPVGGPRQDS---------KPIRVAAADDCP-------NHVARKLCEVPGCEVQPSYGIKG 155
            M ++GRI RFC+ H++P V+V      CQ+  C   PRYG   GPL+FC  HKR GMYT R+G L VATRDGSAF  R+        V G     T  +DA  +     E     +P  GP+ D+          P + A   + P         + RKLCEVPGC VQPS+G  G
Sbjct:   56 MGRDGRIHRFCTRHKEP-VVVLEQAVQCQHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGSAF--RKDPGPPRATVNGDREGATAAADAAAITTGGPETATPATPSRGPKTDAXXXXAPTVLSPSQAAEEVNTPPPGSKKGQTLHRKLCEVPGCNVQPSFGAPG 228          
BLAST of mRNA_H-paniculata_contig4670.11637.1 vs. uniprot
Match: A0A6H5KF29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF29_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.880e-20
Identity = 68/200 (34.00%), Postives = 87/200 (43.50%), Query Frame = 0
Query:    1 MSQNGRIGRFCSEHRKPEVIVTTSETT-----CQYEG------CTNEPRYGARKGPLSFCSDHKRVGMYTNRNGQLMVATRDGSAFQLRRQFRQKVEAVQG-----TTISDAVIV----PETKVENVG-------------------------VRSPVGGPRQDSKPIRVAAADDCPNHVARKLCEVPGCEVQPSYGIKG 155
            M ++GRI RFC+ H++P V++  +        C ++G      C   PRYG   GPL+FC  HKR GMYT R+G L VATRDG AF  R+        V G     TT +DA       PET                               V +P  G ++                + RKLCEVPGC VQPS+G  G
Sbjct:   86 MGRDGRIHRFCARHKEPVVVLEQAVQCEVFHCCGFDGKDMHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGMLYVATRDGIAF--RKDPGPPRATVNGDREGVTTTADAAATTTNGPETAXPXXXXXXXXXXXXXXXXXXXXXXXXXXEEVNTPPPGSKKGPT-------------LHRKLCEVPGCNVQPSFGAPG 270          
BLAST of mRNA_H-paniculata_contig4670.11637.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 2.980e-19
Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = 0
Query:   12 SEHRKPEVIVTTSETTCQYEGCTNEPRYGARKGPLSFCSDHKRVGMYTNRNGQLMVATRDGSAFQLRRQFRQKVEAVQGTTISDAVIVPETKVENVGVRSPVGGPRQDSKPIRVAAADDCPNHVARKLCEVPGCEVQPSYGI 153
            +E +KP V   T    C++ GCT  PRYG + GPL+ C  HKR G+YT R+G L+VATRDGSAF+ +      V + +  T + A    + +  +  ++   G P         +  +     +  + C  PGC+++P YG+
Sbjct:  170 TEDKKPAVASRTEY--CKHTGCTRTPRYGRKNGPLTLCQSHKRAGLYTVRDGVLLVATRDGSAFREKAGSSSSVNSNKNGTATGAAARRKCEAPDCTIQPSYGDPGTSRPRFCSSHKEKQMVSLKNRPCLFPGCDIRPHYGL 309          
BLAST of mRNA_H-paniculata_contig4670.11637.1 vs. uniprot
Match: A0A6H5KL62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL62_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 4.090e-10
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0
Query:   18 EVIVTTSETTCQYEGCTNEPRYGARKGPLSFCSDHKRVGMYTNRNGQLMVATRDGS 73
            ++ VT+    C++ GC    RYG + GPL  C  HKR G+YT R+G L+VATRDGS
Sbjct:  167 KLAVTSRTEYCKHAGCFRALRYGRKNGPLMLCQSHKRAGLYTVRDGVLLVATRDGS 222          
BLAST of mRNA_H-paniculata_contig4670.11637.1 vs. uniprot
Match: D7G079_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G079_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.380e-8
Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 0
Query:   57 MYTNRNGQLMVATRDGSAFQLRRQFRQKV---EAVQGTTISDAVIVPETKVENVGVRSPVGGPRQDSKPIRVAAADDCPNHVARKLCEVPGCEVQPSYGIKG 155
            MYT+R+G+L++ATRDGSA  +R+    +    +A+    ++     PE      G   P  GPR D   +RV         + RKLCEV GC VQPSYG+ G
Sbjct:    1 MYTSRDGKLLMATRDGSA--IRKAAAPRAVGPKAIPSKKVAKRAPKPE------GAADPSAGPRPD---LRVQT-------MYRKLCEVEGCLVQPSYGLSG 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4670.11637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LH38_ECTSI7.700e-2940.34EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KF29_9PHAE1.880e-2034.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G084_ECTSI2.980e-1933.10Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KL62_9PHAE4.090e-1050.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G079_ECTSI1.380e-839.22EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4670contigH-paniculata_contig4670:2619..6086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4670.11637.1mRNA_H-paniculata_contig4670.11637.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4670 2619..6115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4670.11637.1 ID=prot_H-paniculata_contig4670.11637.1|Name=mRNA_H-paniculata_contig4670.11637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MSQNGRIGRFCSEHRKPEVIVTTSETTCQYEGCTNEPRYGARKGPLSFCS
DHKRVGMYTNRNGQLMVATRDGSAFQLRRQFRQKVEAVQGTTISDAVIVP
ETKVENVGVRSPVGGPRQDSKPIRVAAADDCPNHVARKLCEVPGCEVQPS
YGIKGE*
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