prot_H-paniculata_contig46655.11627.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46655.11627.1
Unique Nameprot_H-paniculata_contig46655.11627.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: A0A0C3EEU5_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3EEU5_9AGAM)

HSP 1 Score: 55.8 bits (133), Expect = 2.210e-7
Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVAGKSVK 62
            +YGLKQ+GR W +RLVE+LV  +G TQ   +  V+   +      ++ VHVDD  +A KS+ 
Sbjct:  983 LYGLKQSGRHWYQRLVEILVDELGFTQCSVDQAVYFRRRTPGELIVVVVHVDDCTIAAKSLN 1044          
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: A0A0A9YFJ4_LYGHE (Copia protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YFJ4_LYGHE)

HSP 1 Score: 54.7 bits (130), Expect = 5.450e-7
Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVAGKSVK 62
            +YGLKQ+GR W  +L E L   +G+  SKS+PCV+ L+K      IL ++VDDL +A K++ 
Sbjct:   58 LYGLKQSGRQWYLKLDEKL-KKLGLKPSKSDPCVYTLDKGTEDVVILTIYVDDLCLASKNLS 118          
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: T1JFF8_STRMM (Integrase catalytic domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JFF8_STRMM)

HSP 1 Score: 54.7 bits (130), Expect = 5.580e-7
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVAGKS 60
            +YGLKQ+GR W+K+L +  +  VG+ + KS+PC++  EK G    IL   VDD++VAG S
Sbjct:  630 LYGLKQSGRCWNKKL-DAALKQVGLKRLKSDPCIYLYEK-GENVLILGAFVDDIIVAGSS 687          
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: A0A2R6NJS8_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NJS8_9APHY)

HSP 1 Score: 53.5 bits (127), Expect = 1.440e-6
Identity = 23/61 (37.70%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVAGKSV 61
            +YGLKQ+GR W K+L E + + +G  + +++ C++ L++ G +  ++ V+VDD+ VAGK +
Sbjct:  713 LYGLKQSGRQWKKKLDEAM-AELGFEKGQADECLYVLKEDGHIVLMVLVYVDDMAVAGKKL 772          
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: A0A0A9WCG6_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WCG6_LYGHE)

HSP 1 Score: 52.8 bits (125), Expect = 2.600e-6
Identity = 25/62 (40.32%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVAGKSVK 62
            +YGLKQ+GR W KR+ EVL+  +G+ Q+K+EPC++  ++   V  ++ + VDD+++   S K
Sbjct:  312 IYGLKQSGRCWYKRIHEVLIK-LGLEQTKAEPCLYH-KRENTVKIVIGIFVDDILLLTDSTK 371          
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: A0A165BJT7_EXIGL (Uncharacterized protein (Fragment) n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165BJT7_EXIGL)

HSP 1 Score: 52.8 bits (125), Expect = 2.700e-6
Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVAGKSVK 62
            +YGLKQ+GR W +RLVE+L   +  T+S+ +  VF     G    I+ VHVDD  +A  +V+
Sbjct:  829 LYGLKQSGRRWYQRLVEILCGKLAFTRSEVDQAVFFKVVRGGQLVIVVVHVDDCTIAASTVQ 890          
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: W8BNV5_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BNV5_CERCA)

HSP 1 Score: 52.4 bits (124), Expect = 3.630e-6
Identity = 24/57 (42.11%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVA 57
            +YGLKQ+GR+W ++L    +SN+GM+ SKS+PC++       +  ++ ++VDDL+VA
Sbjct:  247 IYGLKQSGRLWYQKL-HTKLSNMGMSASKSDPCLYTYNNNNTII-LIAIYVDDLIVA 301          
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: A0A0C3DBP3_9AGAM (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3DBP3_9AGAM)

HSP 1 Score: 52.4 bits (124), Expect = 3.680e-6
Identity = 23/61 (37.70%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVAGKSV 61
            +YGLKQAGR W K+L E++   + + +S+++ C++   + G V  ++  +VDD+ VAGK++
Sbjct:  697 LYGLKQAGRQWKKKLDEIM-GKLSLEKSQADDCLYIHHEDGIVALLVLAYVDDMAVAGKNL 756          
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: A0A4V3X9D1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4V3X9D1_9APHY)

HSP 1 Score: 52.0 bits (123), Expect = 4.810e-6
Identity = 22/61 (36.07%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVAGKSV 61
            +YGLKQ+G+ W K+L E + + +G  + +++ C++ L++ G +  ++ V+VDD+ VAGK +
Sbjct:  260 LYGLKQSGQQWKKKLDEAM-AELGFEKGQADECLYVLKEDGHIVLMVLVYVDDMAVAGKKL 319          
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Match: A0A6A3CQG6_HIBSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CQG6_HIBSY)

HSP 1 Score: 52.0 bits (123), Expect = 4.940e-6
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVHVDDLMVAGKSV 61
            +YGLKQA R WSK+L+E L+  VG  QSK +  +F  +K+G+   I+ V+VDDL+V    V
Sbjct:   93 LYGLKQASRQWSKKLIEALIL-VGFVQSKFDYLLFT-KKLGSRMVIVVVYVDDLLVPRNDV 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46655.11627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C3EEU5_9AGAM2.210e-741.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A0A9YFJ4_LYGHE5.450e-745.16Copia protein (Fragment) n=1 Tax=Lygus hesperus Ta... [more]
T1JFF8_STRMM5.580e-746.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A2R6NJS8_9APHY1.440e-637.70Integrase catalytic domain-containing protein n=1 ... [more]
A0A0A9WCG6_LYGHE2.600e-640.32Retrovirus-related Pol polyprotein from transposon... [more]
A0A165BJT7_EXIGL2.700e-641.94Uncharacterized protein (Fragment) n=2 Tax=Exidia ... [more]
W8BNV5_CERCA3.630e-642.11Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C3DBP3_9AGAM3.680e-637.70Integrase catalytic domain-containing protein (Fra... [more]
A0A4V3X9D1_9APHY4.810e-636.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3CQG6_HIBSY4.940e-647.54Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..62
e-value: 3.2E-8
score: 33.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46655contigH-paniculata_contig46655:27..236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46655.11627.1mRNA_H-paniculata_contig46655.11627.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46655 2..293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46655.11627.1 ID=prot_H-paniculata_contig46655.11627.1|Name=mRNA_H-paniculata_contig46655.11627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
MYGLKQAGRMWSKRLVEVLVSNVGMTQSKSEPCVFKLEKIGAVDRILCVH
VDDLMVAGKSVKCDSLFVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2