prot_H-paniculata_contig46647.11624.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46647.11624.1
Unique Nameprot_H-paniculata_contig46647.11624.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length123
Homology
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: A0A7M5XDS1_9CNID (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XDS1_9CNID)

HSP 1 Score: 91.3 bits (225), Expect = 2.260e-20
Identity = 47/123 (38.21%), Postives = 74/123 (60.16%), Query Frame = 0
Query:    3 QRFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVEGKVKISAPESADKPYEPKGM---LGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYL 122
            ++F +   G ++ +LG+ VRRD   GII I Q + +  VL+R+G+DECR ++TP+E           +KP   K     +GSL+YAS GTRPD++Y+V   ++ M  P  E +   +R+FRY+
Sbjct:   80 EKFDMVDQGEINYILGMRVRRDRQAGIIRIDQSAYLRNVLQRFGMDECRPISTPMETGKSFEKLAPDEKPVNLKSYQAAIGSLIYASIGTRPDLSYSVGVLSQYMSHPSEEHWKGVKRVFRYI 202          
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3)

HSP 1 Score: 94.0 bits (232), Expect = 6.980e-20
Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 0
Query:    1 MNQRFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVEGKVKISAPESADKPYEPK------------GMLGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYLS 123
            + + F +  LG    ++G+EV+RD     I++ Q S +  +LK+YG++ CR V+TP++  V ++     D   EP+              +GSLMYA+ GTRPDIAYAVQ+ ++   +P    ++  +R+FRYL+
Sbjct:  943 LKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKKYGMENCRPVSTPMDPNVVLTRVNENDVKDEPREDRDERLGGRYAAAVGSLMYAAIGTRPDIAYAVQKLSKYSSNPGNSHWTALKRVFRYLA 1077          
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: A0A1Y1M4P7_PHOPY (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1M4P7_PHOPY)

HSP 1 Score: 87.4 bits (215), Expect = 1.120e-19
Identity = 42/121 (34.71%), Postives = 75/121 (61.98%), Query Frame = 0
Query:    4 RFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVEGKVKI-SAPESADKPYEPKGMLGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYLS 123
            +F ++ +G LS  LG+++ R+   G ITI+Q   + ++L +Y + +C  + TP+E K+ + S  ES DKPY  + +LGSL++A  G+RPD+ +A+   +R    P    + + +R+ RY+S
Sbjct:   12 KFEMQDIGELSLFLGMKIHRNFEKGEITINQEQYLDKILLKYNMQDCNPIETPMEVKLNLQSEDESCDKPY--RELLGSLLFAMLGSRPDLNFALSYLSRSQNQPTETAWKSLKRVLRYIS 130          
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: A0A146HMH3_MYCCL (Polyprotein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HMH3_MYCCL)

HSP 1 Score: 92.8 bits (229), Expect = 1.790e-19
Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 0
Query:    7 VKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVEGKVKISAPESA----------DKPYEPKGMLGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYL 122
            V  LG +  +LGIEV+RD     I +SQ + I  +L+RYG+DE + V+TP+E    +S+ +S           D PY     +GSLMY +  TRPDIAYAVQ  +R +K P    +   +RIFRYL
Sbjct: 1191 VSDLGEIHWILGIEVKRDRAARTIHLSQRAYIDSILRRYGLDELKPVSTPMETSANLSSSQSPSSTSDLALMRDVPYN--AAVGSLMYCAVATRPDIAYAVQSVSRFLKTPGPAHWDAVKRIFRYL 1314          
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: H3G6C9_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6C9_PHYRM)

HSP 1 Score: 89.4 bits (220), Expect = 3.790e-19
Identity = 48/123 (39.02%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    1 MNQRFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVEGKVKISAPESADKPYEP-KGMLGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYL 122
            +  RF +   G  + +LGIE+  D P+G +T+ Q   + ++LKR+ +DEC+ V +PV+   ++   ++A K   P +  +G+LMY  T TRPDIAYAV   +R M++P  E +   +RIFRYL
Sbjct:   63 LKTRFEMTDSGKCAFVLGIELV-DGPDGSVTMCQRRYVDDILKRFAMDECKAVVSPVDMSTRLVPSDAATKVNAPFREAVGALMYLMTATRPDIAYAVGYVSRFMENPQEEHWVAVKRIFRYL 184          
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: H3H7G8_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7G8_PHYRM)

HSP 1 Score: 87.4 bits (215), Expect = 6.110e-19
Identity = 47/123 (38.21%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    1 MNQRFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVEGKVKISAPESADKPYEP-KGMLGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYL 122
            +  RF +   G  + +LGIE+  D P+G +T+ Q   + ++LKR+ +DEC+ V +PV+   ++   ++A K   P +  +G+LM+  T TRPDIAYAV   +R M++P  E +   +RIFRYL
Sbjct:   51 LKTRFEMTDSGKCAFVLGIELV-DGPDGSVTMCQRRYVDDILKRFAMDECKAVVSPVDMSTRLVPSDAATKVNAPFREAVGALMHLMTATRPDIAYAVGYVSRFMENPQEEHWVAVKRIFRYL 172          
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: A0A293MM55_ORNER (Reverse transcriptase, gag, polyprotein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MM55_ORNER)

HSP 1 Score: 90.9 bits (224), Expect = 8.390e-19
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 0
Query:    1 MNQRFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVE-GKVKISAPESADK-----PYEPKGMLGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYL 122
            + ++  +K LG    +LG+EV+RD   G I+ISQ   IGEVLKRYG++ C+ V+TP+E G  +  +    ++     PY+   ++GSLMY   GTRPDIA+AV   +   K      +S  +R+ RYL
Sbjct: 1047 LGEKIELKDLGEPKYILGLEVKRDKTQGTISISQKKYIGEVLKRYGMENCKPVSTPIEPGLTQEESTSQREEQLQGIPYQ--SLIGSLMYLVQGTRPDIAFAVNYLSEFNKSFTSRHWSMAKRVLRYL 1172          
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: A0A2W0BH45_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2W0BH45_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 1.570e-18
Identity = 48/128 (37.50%), Postives = 75/128 (58.59%), Query Frame = 0
Query:    3 QRFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVEGKVKISAPESADKPY--------EPKGMLGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYL 122
            +R+++  LG  S+ LG+E+ RD  +  + + Q + I  VLKR+ +D+C GV+TP+E   ++ A   AD+ Y        E +  LGS+MYA  GTRPD+AY +   ++   +P  E  +   RIFRYL
Sbjct:   69 KRYKMTDLGPASQFLGLEISRDRESRTLHLHQSTYIKHVLKRFQMDQCNGVSTPMEPNARLHA---ADEGYIALENDILEYQQALGSIMYAMLGTRPDLAYPISSLSKFSINPSFEHAAAIHRIFRYL 193          
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: H3H5N2_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5N2_PHYRM)

HSP 1 Score: 87.4 bits (215), Expect = 2.340e-18
Identity = 47/123 (38.21%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    1 MNQRFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVEGKVKISAPESADKPYEP-KGMLGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYL 122
            +  RF +   G  + +LGIE+  D P+G +T+ Q   + ++LKR+ +DEC+ V +PV+   ++   ++A K   P +  +G+LM+  T TRPDIAYAV   +R M++P  E +   +RIFRYL
Sbjct:   82 LKTRFEMTDSGKCAFVLGIELV-DGPDGSVTMCQRRYVDDILKRFAMDECKAVVSPVDMSTRLVPSDAATKVNAPFREAVGALMHLMTATRPDIAYAVGYVSRFMENPQEEHWVAVKRIFRYL 203          
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Match: A0A2G8RNC8_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RNC8_9APHY)

HSP 1 Score: 89.4 bits (220), Expect = 2.920e-18
Identity = 46/131 (35.11%), Postives = 78/131 (59.54%), Query Frame = 0
Query:    1 MNQRFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDECRGVTTPVEGKVKISAPESADKPYEPKGM--------LGSLMYASTGTRPDIAYAVQQAARRMKDPCREDFSTCRRIFRYLS 123
            + + F +   G +  +LG  V RD     +++SQ + I  +++R+G+D+ + ++TP++  V++SA +S     E  GM        +GSL YAS GTRPDI YAV   +R +++P R  +  C+R+FRYL+
Sbjct: 1183 LREAFEISDEGEIHWILGFAVIRDRSARTLSLSQTAYIDAIIRRFGLDDAKPLSTPMDPHVQLSAEQSPKTMAEVAGMRNVPYREAVGSLQYASLGTRPDITYAVSVLSRFLENPGRAHWEACKRVFRYLA 1313          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46647.11624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7M5XDS1_9CNID2.260e-2038.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A067T5Q4_GALM36.980e-2034.81Integrase catalytic domain-containing protein (Fra... [more]
A0A1Y1M4P7_PHOPY1.120e-1934.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A146HMH3_MYCCL1.790e-1942.06Polyprotein (Fragment) n=1 Tax=Mycena chlorophos T... [more]
H3G6C9_PHYRM3.790e-1939.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7G8_PHYRM6.110e-1938.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A293MM55_ORNER8.390e-1939.84Reverse transcriptase, gag, polyprotein (Fragment)... [more]
A0A2W0BH45_9BACT1.570e-1837.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H5N2_PHYRM2.340e-1838.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RNC8_9APHY2.920e-1835.11Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..57
e-value: 1.0E-6
score: 28.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46647contigH-paniculata_contig46647:787..1239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46647.11624.1mRNA_H-paniculata_contig46647.11624.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46647 772..1239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46647.11624.1 ID=prot_H-paniculata_contig46647.11624.1|Name=mRNA_H-paniculata_contig46647.11624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
MNQRFRVKALGSLSRMLGIEVRRDHPNGIITISQGSNIGEVLKRYGVDEC
RGVTTPVEGKVKISAPESADKPYEPKGMLGSLMYASTGTRPDIAYAVQQA
ARRMKDPCREDFSTCRRIFRYLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2