prot_H-paniculata_contig4661.11616.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4661.11616.1
Unique Nameprot_H-paniculata_contig4661.11616.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length221
Homology
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: D8LQC1_ECTSI (Rab11A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC1_ECTSI)

HSP 1 Score: 400 bits (1028), Expect = 1.980e-140
Identity = 205/218 (94.04%), Postives = 214/218 (98.17%), Query Frame = 0
Query:    3 SGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAANNAAGPNLSQGETIALSSARDDAGSRSKSSCAGSCK 220
            +GKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVML+GNKSDLRHLRTV+ EEAMEFA+KHNLAF+ETSALDASGVD+AFQRILTEIYRLMSRKTIAAN A GP+LS+GETIALSSARDDA +RSKSSCAGSCK
Sbjct:    2 AGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANTATGPDLSRGETIALSSARDDASNRSKSSCAGSCK 219          
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: A0A836CE16_9STRA (Rab11A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE16_9STRA)

HSP 1 Score: 355 bits (910), Expect = 2.030e-122
Identity = 187/217 (86.18%), Postives = 201/217 (92.63%), Query Frame = 0
Query:    3 SGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAANNAAG-PNLSQGETIALSS-ARDDAGSRSKSSCAG 217
            +GK++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTE K IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH+TFENVERWLKELRDHAEANIVVMLVGNK DLRHLRTVS EEA EFAEK+ LAFIETSALDASGVDTAFQRILTEIYRLM++K ++A  ++  P L QGETIALSS A D AGSRSK++C+G
Sbjct:    2 AGKDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTENKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHITFENVERWLKELRDHAEANIVVMLVGNKCDLRHLRTVSVEEATEFAEKNKLAFIETSALDASGVDTAFQRILTEIYRLMNKKQMSAGGSSPTPALGQGETIALSSGATDKAGSRSKTACSG 218          
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: A0A7S2V252_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V252_9STRA)

HSP 1 Score: 351 bits (900), Expect = 6.100e-121
Identity = 189/219 (86.30%), Postives = 203/219 (92.69%), Query Frame = 0
Query:    1 MASGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAA--NNAAGPNLSQGETIALSSARDDAGSRS--KSSC 215
            M +GK+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR VSTEEAM FAEK+NLAFIETSALDASGVDTAFQRILTEIYRLMSR+++ A  N+A    +S+GETI+L++ + D GSRS  KS+C
Sbjct:    1 MMAGKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALDASGVDTAFQRILTEIYRLMSRRSVLAGGNDAV---ISRGETISLAATQGD-GSRSSSKSNC 215          
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: A0A6V0CK96_9STRA (Hypothetical protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=A0A6V0CK96_9STRA)

HSP 1 Score: 349 bits (896), Expect = 2.480e-120
Identity = 179/217 (82.49%), Postives = 195/217 (89.86%), Query Frame = 0
Query:    1 MASGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAN--NAAGPNLSQGETIALSSARDDAGSRSKSSC 215
            MA+  ++EYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR V T+EAM F+E+HNLAFIETSALDASGVDTAFQRILTEIYRLMSR+ +AA   NA GP+L+ G++I+L    ++AG   K  C
Sbjct:    1 MAARVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMSFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNVAAEEANAGGPSLTAGQSISLGGGNNNAGQGEKKGC 217          
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: B5YND5_THAPS (Rab-type small GTPase n=3 Tax=Thalassiosira TaxID=35127 RepID=B5YND5_THAPS)

HSP 1 Score: 344 bits (882), Expect = 3.030e-118
Identity = 177/201 (88.06%), Postives = 188/201 (93.53%), Query Frame = 0
Query:    1 MASGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAANNAAG-PNLSQGETIAL 200
            MA+  ++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR V T+EAM F+E+HNLAFIETSALDASGVDTAFQRILTEIYRLMSR+ +AA + A  P LS G+TI+L
Sbjct:    1 MATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMAAEDGANAPQLSSGQTISL 201          
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: B7GDZ3_PHATC (Predicted protein n=5 Tax=Bacillariophyta TaxID=2836 RepID=B7GDZ3_PHATC)

HSP 1 Score: 338 bits (868), Expect = 3.960e-116
Identity = 177/216 (81.94%), Postives = 189/216 (87.50%), Query Frame = 0
Query:    1 MASGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAANNAAGPNLSQGETIALSSARDDAGSRSKSSCA 216
            MAS  ++EYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR V T+EAM F+E+HNLAFIETSALDASGVDTAFQRILTEIYRLMSR+ + A   A   +S G  I+LS     +G + K  CA
Sbjct:    1 MASRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMQAEENANAPMSAGHKISLS----QSGDKKKGCCA 212          
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: A0A7S0C1Y2_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1Y2_9STRA)

HSP 1 Score: 337 bits (863), Expect = 6.760e-115
Identity = 177/218 (81.19%), Postives = 189/218 (86.70%), Query Frame = 0
Query:    1 MASGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAANNAAGPN-LSQGETIALSSARDDAGSRSKSSCAG 217
            M+  +++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR V T+EAM F+E+HNLAFIETSALDASGVDTAFQRILTEIYRLMSR+ I A  AA    L  G+ I L    +D  + +K  C G
Sbjct:   30 MSGPRDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMSFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNIQAEEAANATTLGDGQKINL----NDTSTNTKPGCCG 243          
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: A0A024TRU3_9STRA (Uncharacterized protein n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRU3_9STRA)

HSP 1 Score: 332 bits (852), Expect = 1.380e-113
Identity = 178/221 (80.54%), Postives = 192/221 (86.88%), Query Frame = 0
Query:    1 MASGKEDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAANNAAGPNLSQGETIALSS-----ARDDAGSRSKSSC 215
            MA+GK DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TFENVERWLKELRDHA+AN V+MLVGNKSDLRHLR V TEEAM FAEKHNLAF+ETSALDA+GVDTAFQRILTEIY LMSRKT+ A   +  +L QG  I ++S     A    GS+ KS+C
Sbjct:    1 MATGKADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHPTFENVERWLKELRDHADANTVIMLVGNKSDLRHLRAVQTEEAMAFAEKHNLAFLETSALDATGVDTAFQRILTEIYNLMSRKTMQAEEHSA-SLPQGNKIEINSDNAPTAAAAKGSKKKSAC 220          
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: A0A024GTW1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTW1_9STRA)

HSP 1 Score: 330 bits (846), Expect = 9.520e-113
Identity = 173/216 (80.09%), Postives = 192/216 (88.89%), Query Frame = 0
Query:    1 MASGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAANNAAGPNLSQGETIALSSARDDAG-SRSKSSC 215
            MAS KED+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATKSI  EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KHVTFENVERWLKELR+HA+AN V+MLVGNKSDLRHLR V TEEAM FAEK+NLAFIETSAL+A GVD+AFQRILTEIY+LMSRKTI A  +   +L  G+ I ++S + + G  + KSSC
Sbjct:    1 MASPKEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTFENVERWLKELREHADANTVIMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTIQAEESQ-ISLPSGDNIVITSDKTEEGVKKKKSSC 215          
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Match: H6WB88_VAULI (Rab11 family GTPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB88_VAULI)

HSP 1 Score: 331 bits (848), Expect = 3.290e-112
Identity = 172/213 (80.75%), Postives = 190/213 (89.20%), Query Frame = 0
Query:    5 KEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAANNAAGPNLSQGETIALSSARDDAGSRSKSSCAG 217
            K++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFN+ESKSTIGVEFATKSIQTE K IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TFEN ERWLKELRDHAE+NIVVMLVGNK DLRHLRTVS EEA EFAEK++LAFIETSALD+SGVDTAFQ+ILTEIY+LM++K ++ N     N+ QGE IAL+S  D A S   S+C+G
Sbjct:   58 KDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVMLVGNKCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQMSGNGNNSLNIGQGERIALNSGGDKA-SGDGSACSG 269          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4661.11616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQC1_ECTSI1.980e-14094.04Rab11A, RAB family GTPase n=2 Tax=Ectocarpus TaxID... [more]
A0A836CE16_9STRA2.030e-12286.18Rab11A, rab family GTPase n=1 Tax=Tribonema minus ... [more]
A0A7S2V252_9STRA6.100e-12186.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V0CK96_9STRA2.480e-12082.49Hypothetical protein n=8 Tax=Bacillariophyta TaxID... [more]
B5YND5_THAPS3.030e-11888.06Rab-type small GTPase n=3 Tax=Thalassiosira TaxID=... [more]
B7GDZ3_PHATC3.960e-11681.94Predicted protein n=5 Tax=Bacillariophyta TaxID=28... [more]
A0A7S0C1Y2_9STRA6.760e-11581.19Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A024TRU3_9STRA1.380e-11380.54Uncharacterized protein n=11 Tax=Saprolegniaceae T... [more]
A0A024GTW1_9STRA9.520e-11380.09Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
H6WB88_VAULI3.290e-11280.75Rab11 family GTPase n=1 Tax=Vaucheria litorea TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 54..76
score: 52.87
coord: 116..129
score: 53.31
coord: 36..52
score: 36.48
coord: 151..173
score: 38.41
coord: 13..34
score: 55.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 10..176
e-value: 5.1E-27
score: 105.8
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 15..173
e-value: 3.0E-12
score: 37.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 13..176
e-value: 8.7E-112
score: 387.4
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 18..219
e-value: 4.6E-9
score: 46.1
NoneNo IPR availableGENE3D3.40.50.300coord: 10..198
e-value: 4.6E-70
score: 236.8
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 5..189
NoneNo IPR availablePANTHERPTHR24073:SF581RAB11B, MEMBER RAS ONCOGENE FAMILY, Bcoord: 5..189
NoneNo IPR availablePROSITEPS51419RABcoord: 8..215
score: 35.923
IPR001806Small GTPasePFAMPF00071Rascoord: 14..174
e-value: 3.4E-62
score: 208.8
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..169
e-value: 3.1E-44
score: 148.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4661contigH-paniculata_contig4661:1974..11011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4661.11616.1mRNA_H-paniculata_contig4661.11616.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4661 493..11510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4661.11616.1 ID=prot_H-paniculata_contig4661.11616.1|Name=mRNA_H-paniculata_contig4661.11616.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=221bp
MASGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFA
TKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTF
ENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMEFAEKHNLA
FIETSALDASGVDTAFQRILTEIYRLMSRKTIAANNAAGPNLSQGETIAL
SSARDDAGSRSKSSCAGSCK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase