prot_H-paniculata_contig4654.11609.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4654.11609.1
Unique Nameprot_H-paniculata_contig4654.11609.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length474
Homology
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BLAST of mRNA_H-paniculata_contig4654.11609.1 vs. uniprot
Match: D7G8N9_ECTSI (Myb-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N9_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 2.220e-92
Identity = 148/205 (72.20%), Postives = 169/205 (82.44%), Query Frame = 0 
Query:  279 KWEVDSEIGAPWDEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERSPKEARQRWLRLTGRL-------GNEEEQ---LSDGPPLDSFYLQPPVLEEWEEVAGSDGIGSFRGKVFGQRGLADGTAMTTAPVDVDGWRIQDQYVATKCGVVYELGERRRVDLVGQAQSKLLKFAPVTGLALATAFYALTVLSHHVQVEVFVI 473
            +WE  +E  A W EFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMER+P+EAR+RWLRLTGRL       G+  E+   ++  P LD+FY+QPPVLE+WEE+   +G+GSFRG VFGQRGLADGTAMTTAP+D+ G +IQDQYVAT+CGVVYELGERR  DLV QA SK+LK AP T LALA AFYALT LSHH+QVEVFVI
Sbjct:  159 EWEGGAE--AAWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGAEGGSRRERGEVMAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQASSKMLKIAPATVLALAGAFYALTALSHHIQVEVFVI 361
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BLAST of mRNA_H-paniculata_contig4654.11609.1 vs. uniprot
Match: A0A836CN06_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN06_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.120e-55
Identity = 105/212 (49.53%), Postives = 131/212 (61.79%), Query Frame = 0 
Query:  285 EIGAPWDEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERSPKEARQRWLRLTGRLGNEEEQ-----------------LSDGPPLDSFYLQPPVLEEWEEVAGSDGIGSFRGKVFGQRGLADGTAMTTAPVDVDGWRIQDQYVATKCGVVYELGERRRVD------LVGQAQSKLLKFAPVTGLALATAFYALTVLSHHVQVEVFVI 473
            E   PW EFEDWLLQDT++RYAIGSGKHVLW RMV EVPEL+ R+P+EAR+RWL +TGRL ++ +                   S  P +++FYLQPP+L +WEE+      GSF G V G  GLADG  + T  VD+ G R+ DQYV T+CG V+ELG RR  D       +    S     AP+  LA A A    TVL+HHVQ+EVFV+
Sbjct:   21 EADMPWTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLTDQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELED----GSFEGSVEGMGGLADGVLVRTRGVDLAGRRVADQYVRTECGAVFELGARRGADDDAATTALAPVASAFAAAAPLLALASAAAVLGATVLTHHVQLEVFVV 228
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4654.11609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8N9_ECTSI2.220e-9272.20Myb-like domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CN06_9STRA2.120e-5549.53Myb-like domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..473
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.678
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 289..341
score: 6.481

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4654contigH-paniculata_contig4654:8843..14415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4654.11609.1mRNA_H-paniculata_contig4654.11609.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4654 8689..15477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4654.11609.1 ID=prot_H-paniculata_contig4654.11609.1|Name=mRNA_H-paniculata_contig4654.11609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=474bp
MATARTCPSSFPIAVVLVLALRESLLAGGFVVKAPVPLQHLQQQQQQQQH
SCSTVLDGSAAAAAAAVPRPTRRRCRRLGGSASLGAHDDGETPAVSTSLS
GLEGKTRRGSQHHTSSTACYLAPPSNGPTQDVASASASAAAAAVAAVGGT
TTERSHNSASSGGEGKGAGLNSHTAVAVSTPTTSVSASTDGQQSRHTAAA
AAVAVVGEIAETDQGEEQEAGGRVGVVLVGGQGQGPNGFGVVFEKGQEAQ
GGAVAVGGVSMSSEASPLGADAARTRGRKWEVDSEIGAPWDEFEDWLLQD
TYSRYAIGSGKHVLWRRMVREVPELMERSPKEARQRWLRLTGRLGNEEEQ
LSDGPPLDSFYLQPPVLEEWEEVAGSDGIGSFRGKVFGQRGLADGTAMTT
APVDVDGWRIQDQYVATKCGVVYELGERRRVDLVGQAQSKLLKFAPVTGL
ALATAFYALTVLSHHVQVEVFVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017877Myb-like_dom