prot_H-paniculata_contig4610.11524.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4610.11524.1
Unique Nameprot_H-paniculata_contig4610.11524.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
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BLAST of mRNA_H-paniculata_contig4610.11524.1 vs. uniprot
Match: D7FRP4_ECTSI (Similar to Iron-containing Alcohol Dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP4_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 1.440e-5
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:  134 DLDALDNPASDKHYGDNRALQYGVS----SAVAGAANHFFSADT 173
            DL++L NPA +K YGDN ALQYGV+    +A AGAA+HFFSADT
Sbjct:   51 DLESLANPAKEKDYGDNSALQYGVTVGAEAAGAGAAHHFFSADT 94
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4610.11524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRP4_ECTSI1.440e-565.91Similar to Iron-containing Alcohol Dehydrogenase n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4610contigH-paniculata_contig4610:7786..11074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4610.11524.1mRNA_H-paniculata_contig4610.11524.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4610 7684..11074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4610.11524.1 ID=prot_H-paniculata_contig4610.11524.1|Name=mRNA_H-paniculata_contig4610.11524.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MAIYPAMRGSVASAAIVMMVLALMSPAQPFSLRPYKRMQPPPMPTAARAR
ARAIANSLSSAQPPDFPGGIFSCYESSPLRARRATATAEGAGSRKDGSRD
GGCGGGCRGGGCGRWCRGGTKLRLSAGSDEGIADLDALDNPASDKHYGDN
RALQYGVSSAVAGAANHFFSADT
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