prot_H-paniculata_contig46048.11514.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46048.11514.1
Unique Nameprot_H-paniculata_contig46048.11514.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 2.130e-69
Identity = 105/218 (48.17%), Postives = 149/218 (68.35%), Query Frame = 0
Query:    2 EQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            EQC  +PCVFR+MVD+ + +++ ++VDD++VAG + DC  L   +++K P  NLGE   + GC+ +RD    TL + QT ++D ++ERF++ S S +PAT  ADL P+R+DEEGG+WP R A+G ++W++  +RPD++ AVR VARH+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A+   DRRSVSG+A  +GG  VS  S
Sbjct:  132 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVQSTSRIPATPGADLGPQREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGS 348          
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 4.110e-69
Identity = 105/218 (48.17%), Postives = 149/218 (68.35%), Query Frame = 0
Query:    2 EQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            EQC  +PCVFR+MVD+ + +++ ++VDD++VAG + DC  L   +++K P  NLGE   + GC+ +RD    TL + QT ++D ++ERF++ S S +PAT  ADL P+R+DEEGG+WP R A+G ++W++  +RPD++ AVR VARH+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A+   DRRSVSG+A  +GG  VS  S
Sbjct:  196 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGS 412          
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 4.210e-66
Identity = 104/219 (47.49%), Postives = 149/219 (68.04%), Query Frame = 0
Query:    1 MEQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            +EQC  +PCVFR+MVD+ + +++ ++VDD++VAG + DC  L   +++K P  NLGE   + GC+ +RD    TL + QT ++D ++ RF++ S S +PAT  ADL P+R+DEEGG+WP R A+G ++W++  +RPD++ AVR VARH+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A+   DRRSVSG+A  +GG  VS  S
Sbjct:  419 VEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVARFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGS 636          
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 2.530e-65
Identity = 105/218 (48.17%), Postives = 149/218 (68.35%), Query Frame = 0
Query:    2 EQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            EQC  +PCVFR+MVD+ + +++ ++VDD++VAG + DC  L   +++K P  NLGE   + GC+ +RD    TL + QT ++D ++ERF++ S S +PAT  ADL P+R+DEEGG+WP R A+G ++W++  +RPD++ AVR VARH+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A+   DRRSVSG+A  +GG  VS  S
Sbjct:  909 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGS 1125          
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 2.920e-65
Identity = 105/218 (48.17%), Postives = 149/218 (68.35%), Query Frame = 0
Query:    2 EQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            EQC  +PCVFR+MVD+ + +++ ++VDD++VAG + DC  L   +++K P  NLGE   + GC+ +RD    TL + QT ++D ++ERF++ S S +PAT  ADL P+R+DEEGG+WP R A+G ++W++  +RPD++ AVR VARH+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A+   DRRSVSG+A  +GG  VS  S
Sbjct: 1288 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGS 1504          
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 2.950e-65
Identity = 105/218 (48.17%), Postives = 149/218 (68.35%), Query Frame = 0
Query:    2 EQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            EQC  +PCVFR+MVD+ + +++ ++VDD++VAG + DC  L   +++K P  NLGE   + GC+ +RD    TL + QT ++D ++ERF++ S S +PAT  ADL P+R+DEEGG+WP R A+G ++W++  +RPD++ AVR VARH+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A+   DRRSVSG+A  +GG  VS  S
Sbjct: 1451 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGS 1667          
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 5.440e-65
Identity = 105/218 (48.17%), Postives = 148/218 (67.89%), Query Frame = 0
Query:    2 EQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            EQC  +PCVFR+MVD  + +++ ++VDD++VAG + DC  L   +++K P  NLGE   + GC+ +RD    TL + QT ++D ++ERF++ S S +PAT  ADL P+R+DEEGG+WP R A+G ++W++  +RPD++ AVR VARH+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A+   DRRSVSG+A  +GG  VS  S
Sbjct: 1308 EQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGS 1524          
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5KBH1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH1_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.420e-64
Identity = 96/206 (46.60%), Postives = 138/206 (66.99%), Query Frame = 0
Query:   14 MVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            MVD+ + +++ ++VDD++VAG + DC  L   +++K P  NLGE   + GC+ +RD    TL + QT ++D ++ERF++ S S +PAT  ADL P+R+DEEGG+WP R A+G ++W++  +RPD++ AVR VARH+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A    DRRSVSG+A  +GG  +S  S
Sbjct:    1 MVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDADAGTLRISQTAYIDSMVERFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLTVYVDASYANTD-DRRSVSGLATTVGGTVISHGS 205          
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5K616_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K616_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.140e-64
Identity = 98/218 (44.95%), Postives = 141/218 (64.68%), Query Frame = 0
Query:    2 EQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            EQC  + CVFR+M D+ + +++ ++VDD++VAG + DC  L   +++K P  NLGE   + GC+ +R     TL + QT ++D +++RFE  S S +PA+   DL P+RDDE GG+WP R A+G ++W++  +RPD++ AVR VA H+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A    DRRSVSG+A  +GG  +S  S
Sbjct:   90 EQCKADTCVFRKMADEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERGVEAGTLRISQTAYIDSMVKRFEAQSTSLIPASPGVDLGPKRDDENGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAHHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLTVYVDASYANTD-DRRSVSGLATTVGGTVISHGS 306          
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 3.340e-64
Identity = 102/218 (46.79%), Postives = 147/218 (67.43%), Query Frame = 0
Query:    2 EQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKIPMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPATSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSHNPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDRRSVSGVAVMLGGVAVSFSS 219
            EQC  +PCVFR+MVD+ + +++ ++VDD++VAG + DC  L   +S+K P  NL E   + GC+ +RD    TL + QT ++D +++RF++ S S +PA+   DL P+RDDE+GG+WP R A+G ++W++  +RPD++ AVR VARH+H P  RHW  + KIL Y    R LG+T+ RGS L L VY DA  A+   DRRSVSG+A  +GG  VS  S
Sbjct:  463 EQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGS 679          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46048.11514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVD4_9PHAE2.130e-6948.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTL3_9PHAE4.110e-6948.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K274_9PHAE4.210e-6647.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE2.530e-6548.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE2.920e-6548.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE2.950e-6548.17Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JN00_9PHAE5.440e-6548.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBH1_9PHAE1.420e-6446.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K616_9PHAE2.140e-6444.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE3.340e-6446.79Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46048contigH-paniculata_contig46048:834..1490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46048.11514.1mRNA_H-paniculata_contig46048.11514.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46048 294..1490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46048.11514.1 ID=prot_H-paniculata_contig46048.11514.1|Name=mRNA_H-paniculata_contig46048.11514.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MEQCMVEPCVFREMVDDRISLMLSVHVDDMVVAGEEVDCNRLFDKISQKI
PMTNLGELALYTGCSFDRDWSKDTLTMDQTVFVDYLMERFEITSVSELPA
TSLADLDPRRDDEEGGDWPFRPAVGCLLWLAMITRPDIANAVRDVARHSH
NPCARHWAGVLKILSYPNKNRSLGLTFTRGSRLELDVYADAGVAEKSLDR
RSVSGVAVMLGGVAVSFSS
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