prot_H-paniculata_contig4591.11492.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4591.11492.1
Unique Nameprot_H-paniculata_contig4591.11492.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length146
Homology
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.440e-30
Identity = 67/144 (46.53%), Postives = 88/144 (61.11%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 144
            L+  +DG+TKEARR C  K+  T M+SG+DP DFL  MD  R RLE+M + +PDE YED++LRAL  EY  +R  S + R F L +IR  +  MY D LSR +S   VAGRGVAM A         +++ C  C + GH   +C
Sbjct:   67 LEDSFDGSTKEARRACRYKLFHTTMKSGEDPSDFLAKMDDLRLRLEDMGEKIPDESYEDVLLRALSKEYYFIRQTSHKDRTFGLTEIRTTMVNMYIDELSRKSSGPSVAGRGVAMSAES-------SNVQCRNCQEFGHYANEC 203          
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5JXA1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA1_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 2.670e-10
Identity = 36/145 (24.83%), Postives = 73/145 (50.34%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDCT 145
            L+  Y+  T E  R   + +  T+M+ G++P+DF       R +LE+M + + D R++DI ++    +Y+ ++        F++  ++  +  ++ D   R  +   +AGRG AM         + +   CF C + GH++R+C+
Sbjct:  120 LKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMAT-------KTSGPICFECNEPGHVRRNCS 257          
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.950e-10
Identity = 37/144 (25.69%), Postives = 73/144 (50.69%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 144
            L+  Y+  T EA R   + +  T+M+ G++P+DF       R +LE+M + + D R++DI ++    +Y+ ++        F++  ++  +  ++ D   R  +   +AGRG AM         + +   CF C + GH++R+C
Sbjct:  139 LKANYNRLTDEAIRAELDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMAT-------KTSGPICFECNEPGHVRRNC 275          
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 7.010e-10
Identity = 36/144 (25.00%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 144
            L+  Y+  T E  R   + +  T+M+ G++P+DF       R +LE+M + + D R++DI ++    +Y+ ++        F++  ++  +  ++ D   R  +   +AGRG AM         + +   CF C + GH++R+C
Sbjct:  120 LKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMAT-------KTSGPICFECNEPGHVRRNC 256          
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 7.170e-10
Identity = 36/144 (25.00%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 144
            L+  Y+  T E  R   + +  T+M+ G++P+DF       R +LE+M + + D R++DI ++    +Y+ ++        F++  ++  +  ++ D   R  +   +AGRG AM         + +   CF C + GH++R+C
Sbjct:  120 LKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMAT-------KTSGPICFECNEPGHVRRNC 256          
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 7.460e-10
Identity = 36/144 (25.00%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 144
            L+  Y+  T E  R   + +  T+M+ G++P+DF       R +LE+M + + D R++DI ++    +Y+ ++        F++  ++  +  ++ D   R  +   +AGRG AM         + +   CF C + GH++R+C
Sbjct:  120 LKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMAT-------KTSGPICFECNEPGHVRRNC 256          
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 7.470e-10
Identity = 36/144 (25.00%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 144
            L+  Y+  T E  R   + +  T+M+ G++P+DF       R +LE+M + + D R++DI ++    +Y+ ++        F++  ++  +  ++ D   R  +   +AGRG AM         + +   CF C + GH++R+C
Sbjct:  120 LKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMAT-------KTSGPICFECNEPGHVRRNC 256          
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 7.640e-10
Identity = 36/144 (25.00%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 144
            L+  Y+  T E  R   + +  T+M+ G++P+DF       R +LE+M + + D R++DI ++    +Y+ ++        F++  ++  +  ++ D   R  +   +AGRG AM         + +   CF C + GH++R+C
Sbjct:  120 LKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMAT-------KTSGPICFECNEPGHVRRNC 256          
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 7.650e-10
Identity = 36/144 (25.00%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 144
            L+  Y+  T E  R   + +  T+M+ G++P+DF       R +LE+M + + D R++DI ++    +Y+ ++        F++  ++  +  ++ D   R  +   +AGRG AM         + +   CF C + GH++R+C
Sbjct:  120 LKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMAT-------KTSGPICFECNEPGHVRRNC 256          
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Match: A0A6H5KMR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR7_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.130e-9
Identity = 36/144 (25.00%), Postives = 71/144 (49.31%), Query Frame = 0
Query:    1 LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQPVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLSRPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 144
            L+  Y+  T E      N +  T+M+ G++P+DF       R +LE+M + + D R++DI ++    +Y+ ++        F++  ++  +  ++ D   R  +   +AGRG AM         + +   CF C + GH++R+C
Sbjct:  120 LKANYNRVTDEVISAKLNDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKFIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMAT-------KTSGPICFECNEPGHVRRNC 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4591.11492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5K1J1_9PHAE2.440e-3046.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXA1_9PHAE2.670e-1024.83CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JUN9_9PHAE2.950e-1025.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN28_9PHAE7.010e-1025.00Uncharacterized protein (Fragment) n=3 Tax=Ectocar... [more]
A0A6H5KJB9_9PHAE7.170e-1025.00Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5K3T5_9PHAE7.460e-1025.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1Z9_9PHAE7.470e-1025.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTQ0_9PHAE7.640e-1025.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHG5_9PHAE7.650e-1025.00Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5KMR7_9PHAE1.130e-925.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 130..146
e-value: 2.1E-4
score: 30.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 130..145
e-value: 3.4E-6
score: 26.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 131..144
score: 10.197
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 3..85
e-value: 2.1E-8
score: 33.9
NoneNo IPR availableGENE3D4.10.60.10coord: 108..146
e-value: 2.5E-6
score: 29.3
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 118..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4591contigH-paniculata_contig4591:5632..6069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4591.11492.1mRNA_H-paniculata_contig4591.11492.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4591 5632..6069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4591.11492.1 ID=prot_H-paniculata_contig4591.11492.1|Name=mRNA_H-paniculata_contig4591.11492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp
LQYKYDGNTKEARRECPNKVHTTMMQSGDDPEDFLFVMDGYRDRLEEMEQ
PVPDERYEDIILRALPAEYERVRNASCEKRDFNLADIRRVVSTMYTDYLS
RPNSANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDCTA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf