prot_H-paniculata_contig4584.11479.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4584.11479.1 vs. uniprot
Match: D7G0A0_ECTSI (Vacuolar protein sorting-associated protein 54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A0_ECTSI) HSP 1 Score: 105 bits (262), Expect = 9.830e-22 Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 0
Query: 171 YEDVREELELSGHNLTSVLNNPRETFMDSLYEAAFETEQH-PPLEAVVLPAPP-TREVTIQDVEPFIQRTASLSRVFERNHRRPVGLGLGGQVEEPAA-GSVAANG 273
++DVREELELSGHNLTSVLNNPRETFMDSLYEAAFE E P LE V P RE+T QDVEP++++TA+L++ +ERNH + LG Q P A G ANG
Sbjct: 4 FQDVREELELSGHNLTSVLNNPRETFMDSLYEAAFEAEPPLPDLEVVRANVPHGIREITPQDVEPYLRKTAALTKAYERNHL----VALGQQDAPPGARGGGGANG 105
BLAST of mRNA_H-paniculata_contig4584.11479.1 vs. uniprot
Match: A0A6H5KYH6_9PHAE (Vps54_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH6_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 2.170e-12 Identity = 51/91 (56.04%), Postives = 60/91 (65.93%), Query Frame = 0
Query: 145 GAGTGGGGADLVPVN---DLDDPGIANHNYEDVREELELSGHNLTSVLNNPRETFMDSLYEAAFETEQH-PPLEAVVLPAPP-TREVTIQD 230
GA GG G + + D+ +A +++DVREELELSGHNLTSVLNNPRETFMDSLYEAAFE E P LE V P RE+T Q+
Sbjct: 104 GAAAGGSGTANISASAEGSGDERELAMLHFQDVREELELSGHNLTSVLNNPRETFMDSLYEAAFEAEPPLPDLEVVRANVPHGIREITPQE 194
BLAST of mRNA_H-paniculata_contig4584.11479.1 vs. uniprot
Match: A0A835YJU9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU9_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.780e-10 Identity = 52/117 (44.44%), Postives = 66/117 (56.41%), Query Frame = 0
Query: 162 DDPGIANHNYEDVREELELSGHNLTSVLNNPRETFMDSLYEAAFETEQHPPLEAVVLPAPPTR--EVTIQDVEPFIQRTASLSRVFERNHRRP-VGLGLGGQVEEPAAGSVAANGVA 275
D G + N+ DVREEL+ GHNLTSVLNNPRE+ D LYEA + EQ +E V P EV + +V F++RT SLSR F +H++ GLG P +G NG A
Sbjct: 59 DGDGESVENFTDVREELDRIGHNLTSVLNNPRESVFDMLYEA-LDPEQAYAMETHVEGTPSALHPEVDLSEVVTFLKRTGSLSRGFVNSHQKQRTRPGLGTLSVRPHSGLHRTNGSA 174 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4584.11479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig4584.11479.1 ID=prot_H-paniculata_contig4584.11479.1|Name=mRNA_H-paniculata_contig4584.11479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=287bpback to top |