prot_H-paniculata_contig4580.11475.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4580.11475.1
Unique Nameprot_H-paniculata_contig4580.11475.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length188
Homology
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 2.520e-31
Identity = 76/155 (49.03%), Postives = 98/155 (63.23%), Query Frame = 0
Query:    5 YADLGLVR-AADTMSAVPKVKSHEDIVKEELSDFQEIENCTLDL-VPLRHTLVFWKMHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSDTGLAEMILFLHGNKDLIPDNVTKLTPEQALGAVPSRLRNPISVLTHLDGPFHPV 157
            YA LGL     D  +  P   S E   + EL++ + ++  +L   +     L +WKM A  +P +ARVARVV GAPASAAV+ERD S AGRMMTS+RS+ D+   EMI+FLHGN DLIP+++TKLT   A   +P RL NP+  L  LDG F PV
Sbjct:  559 YASLGLFGPGGDEQNEEPP--SFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRLANPVERLEQLDGVFAPV 711          
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 2.790e-29
Identity = 62/100 (62.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:   59 MHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSD-TGLAEMILFLHGNKDLIPDNVTKLTPEQALGAVPSRLRNPISVLTHLDGPFHPV 157
            M A  +P +ARVARVV GAPASAAV+ERD S AGRMMTS+R + D T   EMILFLHGN DLIP+++TKLT   A   +P RL NP+  L  LDG F PV
Sbjct:    1 MWAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIPGRLANPVEGLEQLDGAFAPV 100          
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 3.490e-29
Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 0
Query:   25 SHEDIVKEELSDFQEIENCTLDL-VPLRHTLVFWKMHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSDTGLAEMILFLHGNKDLIPDNVTKLTPEQALGAVPSRLRNPISVLTHLDGPFHPV 157
            S E   + EL+  + ++  +L   +     L +WKM A  +P +ARVARVV+GA ASAAV+E D S AGRMMTS+RS+ D+   EMILFLHGN DLIP+++TKLT   A   +P RL NP+  L  LDG F PV
Sbjct:  351 SFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPV 484          
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 7.490e-27
Identity = 60/104 (57.69%), Postives = 73/104 (70.19%), Query Frame = 0
Query:   54 LVFWKMHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSDTGLAEMILFLHGNKDLIPDNVTKLTPEQALGAVPSRLRNPISVLTHLDGPFHPV 157
            L +WKM A  +P +ARVARVV GAPASAAV+E   S AGRM TS+RS+ D+   EMI+FLHGN +LIP+++TKLT   A    P RL NP+  L  LDG F PV
Sbjct:  144 LKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEVVARTKFPGRLANPVDGLEPLDGAFAPV 247          
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 6.310e-24
Identity = 69/173 (39.88%), Postives = 92/173 (53.18%), Query Frame = 0
Query:    4 RYADLGLVRAADTMSAVPKVKSHEDIVKEELSDFQEIENCTL-DLVPLRHTLVFWKMHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSDTGLAEMILFLHGNKDLIPDNVTKLTPEQALGAVPSRLRNPISVLTHLDGPFHPVL----DGGDGQDESAHIE 171
            ++A LGL +         +  + E + + EL   + +E  TL D +     L +WK     +P +AR ARVV GAPASAAV+ERD + A  MM S+RS+ D    EM+LFLHGN DLIP+ + +L  E     +P RL NPI  L  LDG    V     +GG G  E    E
Sbjct:  497 KFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGLDGTLGLVDLTNDEGGVGPGEGEESE 669          
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.470e-23
Identity = 56/100 (56.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   59 MHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSDTGL-AEMILFLHGNKDLIPDNVTKLTPEQALGAVPSRLRNPISVLTHLDGPFHPV 157
            M    +  +  VARVV GAPASAA +ERD S AGRMMTS+RS+ D+    EMILFLHGN DLIP+++T LT   A    P RL NP+  L  LDG F PV
Sbjct:    1 MGTHAYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDITTLTEAVARTMFPGRLANPVEGLKQLDGAFTPV 100          
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.250e-21
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 0
Query:   54 LVFWKMHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSDTGLAEMILFLHGNKDLIPDNVTKLTPEQALGA---VPSRLRNPISVLTHLDGPFHPVLDGGDGQDE 166
            L +WK     +P +ARVARVV  APAS  V ERDL +AGRMMTS+RS+ D    EM+LFLHGN DL+P+ + +L  +   G    +P RL NP+  L  LDG F PV    D + E
Sbjct:  650 LNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVDLTNDDESE 765          
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 3.770e-19
Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 0
Query:   40 IENCTLDLVPLRHTLVFWKMHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSDTGLAEMILFLHGNKDLIPDNVTKLTP 129
            ++  T+D +     L +WK     +P +AR ARVV GAPASAAV+E D   AGR+MTS+RS++D    EMILFLHGN DLIP+++    P
Sbjct:   24 LQKRTIDELSCDSVLKWWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIPACQP 113          
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.310e-17
Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = 0
Query:   21 PKVKSHEDIVKEELSDFQ-EIENCTLDLVPLRHTLVFWKMHADR-FPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSDTGLAEMILFLHGNKDLIPDNVTKLTPEQALGAVPSRLRNPISVLTHLD-GPFHPVLDGGDGQDESAHIEYA 173
            P   + +++ ++E   F     + T+   P+   L FW       +P MAR ARV+L  PAS+AV+ERD S AGR++T ARS       EM+LFL+GN++ IP  V KL+  Q   AVP RL NP      L  G   P  +  +  +ES   + A
Sbjct:  679 PSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVPRRLSNPNEETERLSVGEVVPDTNTDEFAEESLECDIA 834          
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Match: A0A6H5KGU9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 5.190e-12
Identity = 45/122 (36.89%), Postives = 59/122 (48.36%), Query Frame = 0
Query:   40 IENCTLDLVPLRHTLVFWKMHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARSSSDTGLAEMILFLHGNKDLIPDNVTKLT---PEQALGA-VPSRLRNPISVLTHLDGPFHPV 157
            ++  T+D +     L +WK     +P +AR  RVV GAPASAA +E                       MILFLHGN DLIPD++  L    P+ A    +P RL+NP   L  + G F PV
Sbjct:   24 LQKRTIDELSCESVLKWWKRWMSSYPLLARATRVVFGAPASAAYVE-----------------------MILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRLKNPNPKLERISGAFGPV 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4580.11475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JZ82_9PHAE2.520e-3149.03Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KCJ3_9PHAE2.790e-2962.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE3.490e-2950.75Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JML0_9PHAE7.490e-2757.69Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LBK4_ECTSI6.310e-2439.88Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KW12_9PHAE1.470e-2356.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LFP4_ECTSI1.250e-2149.14Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L5L6_9PHAE3.770e-1950.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVU5_9PHAE1.310e-1737.18Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KGU9_9PHAE5.190e-1236.89Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 53..115
e-value: 1.2E-9
score: 37.8
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 53..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4580contigH-paniculata_contig4580:5072..5635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4580.11475.1mRNA_H-paniculata_contig4580.11475.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4580 4776..14632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4580.11475.1 ID=prot_H-paniculata_contig4580.11475.1|Name=mRNA_H-paniculata_contig4580.11475.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
MFGRYADLGLVRAADTMSAVPKVKSHEDIVKEELSDFQEIENCTLDLVPL
RHTLVFWKMHADRFPYMARVARVVLGAPASAAVIERDLSAAGRMMTSARS
SSDTGLAEMILFLHGNKDLIPDNVTKLTPEQALGAVPSRLRNPISVLTHL
DGPFHPVLDGGDGQDESAHIEYACDSKVKSEGLVMAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf