prot_H-paniculata_contig4578.11472.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4578.11472.1
Unique Nameprot_H-paniculata_contig4578.11472.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length104
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4578.11472.1 vs. uniprot
Match: D7G8M0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M0_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 4.340e-18
Identity = 43/62 (69.35%), Postives = 54/62 (87.10%), Query Frame = 0 
Query:   12 SAAIMRLSSTYHLYKIALLITPSNAAKDSVIVRAGEISKALYFVISGSVEVIQFKKRRVPNR 73
            S A+MR+SSTYHLYKIALL+   +A KDS+I+RAGE SKALYFV+SG+VEVIQ K++RV N+
Sbjct:    5 SVAMMRMSSTYHLYKIALLVKTDDAVKDSMILRAGEPSKALYFVVSGTVEVIQLKRKRVRNQ 66
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4578.11472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8M0_ECTSI4.340e-1869.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 5..92
e-value: 6.0E-9
score: 37.6
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 15..64
score: 8.139
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 6..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4578contigH-paniculata_contig4578:8248..9769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4578.11472.1mRNA_H-paniculata_contig4578.11472.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4578 8248..9769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4578.11472.1 ID=prot_H-paniculata_contig4578.11472.1|Name=mRNA_H-paniculata_contig4578.11472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
MTLDDKCHYLTSAAIMRLSSTYHLYKIALLITPSNAAKDSVIVRAGEISK
ALYFVISGSVEVIQFKKRRVPNRDARKMNVVGKDGGSGADPQEMGAGGRG
ASGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like