prot_H-paniculata_contig45739.11461.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45739.11461.1
Unique Nameprot_H-paniculata_contig45739.11461.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length129
Homology
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: D8LCT3_ECTSI (Glycine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT3_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 1.550e-67
Identity = 107/125 (85.60%), Postives = 115/125 (92.00%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKRMAAKQ 125
            S+IYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQ RDDIVG+DSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVE+E   GE +GYV V+ S TMQEEA+ AA+K+KR AAKQ
Sbjct:  132 SEIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELE--DGEVIGYVSVLESGTMQEEADTAANKIKRKAAKQ 254          
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: A0A835YRJ7_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ7_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.540e-59
Identity = 97/125 (77.60%), Postives = 110/125 (88.00%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKRMAAKQ 125
            S+IYNGFAGFFDYGPLGVE+KKNIKD WWRDVV+ RDDIVGLDSSII +PK+WEASGHVAGFSDPMVDC+ESKLRYRADQ+F+ +V +  E+GE LG V V+ S TM+ EA AAADKMKR AAKQ
Sbjct:   18 SEIYNGFAGFFDYGPLGVEIKKNIKDLWWRDVVRRRDDIVGLDSSIIGSPKIWEASGHVAGFSDPMVDCRESKLRYRADQVFWARVAL-AETGEVLGAVSVMESGTMEAEAQAAADKMKRKAAKQ 141          
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: A0A6U2HYH8_HEMAN (Glycine--tRNA ligase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2HYH8_HEMAN)

HSP 1 Score: 192 bits (488), Expect = 6.450e-56
Identity = 92/125 (73.60%), Postives = 107/125 (85.60%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKRMAAKQ 125
            S+IYNGFAGF+DYGPLGVELK NIK  WWRD+V  RDD+VGLDSSII++P++W++SGHV GFSDPMVDCKESK+RYRADQLFYGKVE+E   GE LGYV V+ S TMQEEA+  A+ MKR A KQ
Sbjct:  116 SEIYNGFAGFYDYGPLGVELKANIKRVWWRDMVHRRDDMVGLDSSIIASPQIWQSSGHVDGFSDPMVDCKESKMRYRADQLFYGKVELE--DGEVLGYVSVMESGTMQEEADKTANTMKRKAQKQ 238          
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: A0A7R9YDS6_9STRA (Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDS6_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.540e-54
Identity = 89/122 (72.95%), Postives = 102/122 (83.61%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKRMA 122
            S+IYNGF GF+DYGPLGVELKKNIK+AWWR VV  RDD+VG+DSSII +PKVWEASGHVAGFSDPMVDCKESK+RYRADQLF+GKVE +   GE LGYV V+    MQ EA   A+KM++ A
Sbjct:   54 SEIYNGFNGFYDYGPLGVELKKNIKEAWWRAVVYARDDVVGIDSSIIMSPKVWEASGHVAGFSDPMVDCKESKMRYRADQLFFGKVETQ--DGETLGYVSVMEDAAMQAEAEKKAEKMRKSA 173          
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: A0A2E8A7K0_9BACT (Glycine--tRNA ligase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E8A7K0_9BACT)

HSP 1 Score: 181 bits (459), Expect = 2.280e-52
Identity = 86/125 (68.80%), Postives = 104/125 (83.20%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKRMAAKQ 125
            S+IY G  GFFDYGPLGVEL+KNIKDAWW D+V+ RDDIVGLDSSII NPKVWEASGH+ GF+DPMVDCKESK+RYRADQLF  +V ++GES   +G+V ++ S  M+E+A A A+ MKR A+KQ
Sbjct:   25 SEIYGGLNGFFDYGPLGVELRKNIKDAWWNDMVRKRDDIVGLDSSIIMNPKVWEASGHIDGFTDPMVDCKESKMRYRADQLFVAEVVVDGES---IGWVSILESEKMEEDALAMAELMKRKASKQ 146          
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: A0A3D4HGA1_9BACT (Glycine--tRNA ligase (Fragment) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A3D4HGA1_9BACT)

HSP 1 Score: 173 bits (438), Expect = 2.300e-52
Identity = 77/120 (64.17%), Postives = 97/120 (80.83%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKR 120
            S+IY G  GFFDYGPLGVEL+KNIKDAWWRD+V  RDD+VGLD+SII NP+ W++SGH+ GF+DPMVDCKESKLRYRAD L+Y  V ++GE+   +GYV  + S T+ E+  A A+K+KR
Sbjct:   28 SEIYGGINGFFDYGPLGVELRKNIKDAWWRDMVHRRDDVVGLDASIIMNPETWKSSGHIEGFTDPMVDCKESKLRYRADHLYYAPVVVDGET---IGYVSALQSETLDEDTQAQAEKLKR 144          
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: A0A2D7V7H0_9BACT (Glycine--tRNA ligase n=5 Tax=Verrucomicrobia TaxID=74201 RepID=A0A2D7V7H0_9BACT)

HSP 1 Score: 181 bits (458), Expect = 3.210e-52
Identity = 85/127 (66.93%), Postives = 105/127 (82.68%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKRMAAKQVE 127
            S+IY G  GFFDYGPLGVEL+KNIKDAWW D+V+ RDD+VGLDSSI+ NPKVWEASGHV GF+DPMVDCKESK+RYRADQLF  +V++EGES   +G++ ++ S +M E+A   A+ +KR AAKQ E
Sbjct:   25 SEIYGGLNGFFDYGPLGVELRKNIKDAWWEDMVRRRDDVVGLDSSIVMNPKVWEASGHVDGFTDPMVDCKESKMRYRADQLFACEVKVEGES---MGWISLLESESMHEDATRMAENLKRKAAKQGE 148          
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: A0A1Z9K8X0_9BACT (Glycine--tRNA ligase n=3 Tax=Verrucomicrobia TaxID=74201 RepID=A0A1Z9K8X0_9BACT)

HSP 1 Score: 179 bits (453), Expect = 1.810e-51
Identity = 84/125 (67.20%), Postives = 103/125 (82.40%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKRMAAKQ 125
            S+IY G  GFFDYGPLGVEL+KNIKDAWW D+V+ RDD+VGLDS II NPKVW+ASGHV GF+DPMVDCKESK+RYRADQLF  +V+++GE    LG+V ++ S  MQE+A + A+ MKR AA+Q
Sbjct:   25 SEIYGGLNGFFDYGPLGVELRKNIKDAWWEDMVRRRDDMVGLDSGIIMNPKVWQASGHVDGFTDPMVDCKESKMRYRADQLFASEVKVDGEI---LGWVSLIESENMQEDAESMAESMKRKAAQQ 146          
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: A0A6U1N9R4_9STRA (Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N9R4_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.400e-51
Identity = 84/125 (67.20%), Postives = 103/125 (82.40%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKRMAAKQ 125
            S+IYNGF GF+D+GPLGVEL+ NIK AWW+D+V  R+DIVGLDSSII++P +W+ASGHV GFSDPMVDCKESK RYRADQLF+ KVE+E E GE LGY+ ++ S  MQ++A   A KMK+ A KQ
Sbjct:   18 SEIYNGFQGFYDFGPLGVELRNNIKQAWWKDMVHGREDIVGLDSSIIASPAIWKASGHVDGFSDPMVDCKESKNRYRADQLFFAKVEVE-EDGEVLGYLSLLESGDMQDQAEKQAKKMKKKAEKQ 141          
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Match: A0A2E7HP02_9BACT (Glycine--tRNA ligase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E7HP02_9BACT)

HSP 1 Score: 177 bits (449), Expect = 6.780e-51
Identity = 84/125 (67.20%), Postives = 101/125 (80.80%), Query Frame = 0
Query:    1 SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVCVVASPTMQEEANAAADKMKRMAAKQ 125
            S+IY G  GFFDYGPLGVEL+KNIKDAWW D+V+ RDD+VGLDS II NPKVWEASGHV GF+DPMVDCKESK+RYRADQLF  +V ++G S   LG+V ++ S  M++EA   A++MKR AA Q
Sbjct:   25 SEIYGGLNGFFDYGPLGVELRKNIKDAWWEDMVRRRDDMVGLDSGIIMNPKVWEASGHVDGFTDPMVDCKESKMRYRADQLFAAEVRVDGTS---LGWVSLIESEKMEDEATEKAERMKRKAAMQ 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45739.11461.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCT3_ECTSI1.550e-6785.60Glycine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YRJ7_9STRA1.540e-5977.60Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A6U2HYH8_HEMAN6.450e-5673.60Glycine--tRNA ligase n=2 Tax=Hemiselmis andersenii... [more]
A0A7R9YDS6_9STRA1.540e-5472.95Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A2E8A7K0_9BACT2.280e-5268.80Glycine--tRNA ligase n=1 Tax=Opitutae bacterium Ta... [more]
A0A3D4HGA1_9BACT2.300e-5264.17Glycine--tRNA ligase (Fragment) n=1 Tax=Opitutae b... [more]
A0A2D7V7H0_9BACT3.210e-5266.93Glycine--tRNA ligase n=5 Tax=Verrucomicrobia TaxID... [more]
A0A1Z9K8X0_9BACT1.810e-5167.20Glycine--tRNA ligase n=3 Tax=Verrucomicrobia TaxID... [more]
A0A6U1N9R4_9STRA4.400e-5167.20Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica T... [more]
A0A2E7HP02_9BACT6.780e-5167.20Glycine--tRNA ligase n=1 Tax=Opitutae bacterium Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..109
e-value: 1.2E-27
score: 98.8
NoneNo IPR availablePANTHERPTHR10745:SF19coord: 1..108
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 3..87
IPR027031Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2PANTHERPTHR10745GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2coord: 1..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45739contigH-paniculata_contig45739:504..1418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45739.11461.1mRNA_H-paniculata_contig45739.11461.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45739 504..1418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45739.11461.1 ID=prot_H-paniculata_contig45739.11461.1|Name=mRNA_H-paniculata_contig45739.11461.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
SKIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQTRDDIVGLDSSIISNP
KVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEIEGESGEELGYVC
VVASPTMQEEANAAADKMKRMAAKQVEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027031Gly-tRNA_synthase/POLG2