prot_H-paniculata_contig45681.11451.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45681.11451.1
Unique Nameprot_H-paniculata_contig45681.11451.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: D7FYI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI2_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 7.340e-42
Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    2 QAVITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFTKD 87
            QA++TGRR FFYSYDV TGK+ KIPR+FSSGR EKHLETFAASPDG+WLAF G GGYVLL+SSK+KQWAA+FKLNS ATAV F+ D
Sbjct:   90 QAIVTGRRSFFYSYDVVTGKVLKIPRVFSSGRTEKHLETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPD 175          
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: A0A6H5KQH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH1_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 2.220e-40
Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    2 QAVITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFTKD 87
            QA++TGRR FFYSYDV TGK+ KIPR+FSSGR EKHLETFAASPDG+WLAF G GGYVLL+SSK+KQWAA+FKLNS ATAV F+ D
Sbjct:  322 QAIVTGRRSFFYSYDVATGKVLKIPRVFSSGRTEKHLETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPD 407          
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: A0A7S1CWG3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWG3_CYCTE)

HSP 1 Score: 106 bits (265), Expect = 9.270e-26
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    4 VITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFTKD 87
            V++GRRPFFY YD   GK+  +PRI   GR EK LE FAASPDGR +AF G+ GY++LV +KSKQW A+ K+N    AVAFT D
Sbjct:  106 VVSGRRPFFYIYDSVAGKLDLVPRIM--GREEKSLERFAASPDGRTIAFVGNDGYIILVDAKSKQWMADLKMNGSVRAVAFTPD 187          
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: A0A7S3QBK5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBK5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 9.930e-24
Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    4 VITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFT 85
            V++GRRPFFY YD+ +GKI K+PRI   GR EK LE F  SPDG  +AF G+ GY++LV +KSK W A+FK+N  A AV+F+
Sbjct:  378 VVSGRRPFFYIYDMISGKIDKVPRI--QGRKEKSLEKFTTSPDGSLIAFIGNDGYIILVEAKSKMWVADFKMNGSARAVSFS 457          
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: A0A835Z2C0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2C0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.950e-22
Identity = 42/87 (48.28%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    2 QAVITGRRPFFYSYDVPTGKIQKIPRIFSS-GRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFTKD 87
            Q +++G +P FY YDV +G +Q++P I ++ G+A+  L  FA SP+G W+AFA   GY++LVS+K+KQWAA+FKLN    A+ F+ D
Sbjct:  139 QVILSGDKPHFYYYDVQSGVVQRVPSIRNAAGKAQSTLAKFALSPNGEWIAFAASAGYIMLVSAKTKQWAADFKLNCSVEALVFSPD 225          
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: A0A6P8I2R9_ACTTE (U3 small nucleolar RNA-associated protein 18 homolog isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I2R9_ACTTE)

HSP 1 Score: 92.0 bits (227), Expect = 7.600e-20
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    2 QAVITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFTKD 87
            Q ++T RR +FY YD+  GK+ +IP I   GR EK+LE F  SPDG  L F GD GY++LVSS++KQW    K+N    AV F+ D
Sbjct:  259 QVIMTSRRKYFYVYDMIKGKVIRIPHI--RGRCEKNLEKFQVSPDGSHLVFLGDNGYMMLVSSRTKQWIGNLKMNGTVGAVTFSAD 342          
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: A0A6A7G3B9_9CRUS (U3 small nucleolar RNA-associated protein 18 homolog n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G3B9_9CRUS)

HSP 1 Score: 90.9 bits (224), Expect = 1.840e-19
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    2 QAVITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFTKD 87
            Q +++ RR FFYSYDV +GK+++IP+I  +GR EK LE F  SPDG  +AF G+ GY++LVS +++Q     K+N    ++AFT D
Sbjct:  235 QVIVSARRKFFYSYDVQSGKVERIPQI--TGRDEKSLERFEISPDGSCIAFLGNNGYIILVSLRTRQPIGTLKMNGSVRSIAFTSD 318          
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: A0A0D2WT18_CAPO3 (WD-repeat protein 50, variant n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WT18_CAPO3)

HSP 1 Score: 90.5 bits (223), Expect = 2.730e-19
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    2 QAVITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFTK 86
            Q   T RR +FY++++  G I ++P I   GR EK LE+F  SPDG+ L F G  GY++LVS+ SKQW A+FK+N    AVAFT+
Sbjct:  266 QIFATSRRTWFYTFNISEGAIHRVPGI--RGREEKSLESFVVSPDGKHLVFLGKDGYIILVSTVSKQWVADFKMNGTVRAVAFTR 348          
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: UPI00106A402D (U3 small nucleolar RNA-associated protein 18 homolog n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A402D)

HSP 1 Score: 90.1 bits (222), Expect = 3.560e-19
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    2 QAVITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAF 84
            Q ++  +R  FY YD+  G++ +IP I   G+ EKH   F ASPDG++L F G  GY+ L+SSK+KQW A+ K+N   T +AF
Sbjct:  243 QVILASKRKHFYCYDMVNGRVTRIPEI--RGKEEKHFSNFIASPDGKYLVFPGKNGYIYLLSSKTKQWIADLKMNGSVTTIAF 323          
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Match: UPI000A2A62AD (U3 small nucleolar RNA-associated protein 18 homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A62AD)

HSP 1 Score: 88.2 bits (217), Expect = 1.760e-18
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    2 QAVITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWLAFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFTKD 87
            Q ++T R+ +FY YD+  G++ KIP I   GR EK  E    SPDGR + F GD GY++LVSSKSKQW    K+N    AV+F+ D
Sbjct:  253 QVIMTSRKKWFYVYDMMKGQVIKIPGI--RGRNEKKFEKCEVSPDGRHIVFLGDNGYIILVSSKSKQWIGNLKMNXKVDAVSFSAD 336          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45681.11451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI2_ECTSI7.340e-4279.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQH1_9PHAE2.220e-4079.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1CWG3_CYCTE9.270e-2659.52Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3QBK5_9STRA9.930e-2457.32Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A835Z2C0_9STRA4.950e-2248.28WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6P8I2R9_ACTTE7.600e-2050.00U3 small nucleolar RNA-associated protein 18 homol... [more]
A0A6A7G3B9_9CRUS1.840e-1947.67U3 small nucleolar RNA-associated protein 18 homol... [more]
A0A0D2WT18_CAPO32.730e-1949.41WD-repeat protein 50, variant n=2 Tax=Capsaspora o... [more]
UPI00106A402D3.560e-1945.78U3 small nucleolar RNA-associated protein 18 homol... [more]
UPI000A2A62AD1.760e-1848.84U3 small nucleolar RNA-associated protein 18 homol... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011659WD40-like Beta PropellerPFAMPF07676PD40coord: 32..57
e-value: 2.0E-4
score: 21.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..88
e-value: 5.9E-21
score: 76.8
NoneNo IPR availablePANTHERPTHR18359WD-REPEAT PROTEIN-RELATEDcoord: 2..87
NoneNo IPR availablePANTHERPTHR18359:SF0U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 18 HOMOLOGcoord: 2..87
IPR011044Quinoprotein amine dehydrogenase, beta chain-likeSUPERFAMILY50969YVTN repeat-like/Quinoprotein amine dehydrogenasecoord: 6..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45681contigH-paniculata_contig45681:203..1386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45681.11451.1mRNA_H-paniculata_contig45681.11451.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45681 203..1386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45681.11451.1 ID=prot_H-paniculata_contig45681.11451.1|Name=mRNA_H-paniculata_contig45681.11451.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
MQAVITGRRPFFYSYDVPTGKIQKIPRIFSSGRAEKHLETFAASPDGRWL
AFAGDGGYVLLVSSKSKQWAAEFKLNSPATAVAFTKDR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011659PD40
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011044Quino_amine_DH_bsu