prot_H-paniculata_contig45640.11443.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45640.11443.1
Unique Nameprot_H-paniculata_contig45640.11443.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: A0A6H5JD08_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD08_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 2.750e-31
Identity = 60/69 (86.96%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQGV 69
            GSLATAGFGTALGVIR L EKGLL +C+CTETRPYNQGARLTAYEFVA+G PG LIPDSAA+FLMAQGV
Sbjct:  175 GSLATAGFGTALGVIRALDEKGLLASCYCTETRPYNQGARLTAYEFVADGLPGTLIPDSAASFLMAQGV 243          
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: D7FTE3_ECTSI (Methylthioribose-1-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE3_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 9.330e-31
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQG 68
            GSLATAGFGTALGVIR L EKGLL +C+CTETRPYNQGARLTAYEFVA+G PG LIPDSAA+FLMAQG
Sbjct:  175 GSLATAGFGTALGVIRALDEKGLLASCYCTETRPYNQGARLTAYEFVADGLPGTLIPDSAASFLMAQG 242          
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: A0A835YPH9_9STRA (Methylthioribose-1-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.970e-24
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQG 68
            GSLA AGFGTALGVIR L E+GLL+AC+ TETRPYNQGARLTA+E V +  PG LI DS A+FLMAQG
Sbjct:  181 GSLACAGFGTALGVIRALHEEGLLKACYATETRPYNQGARLTAFEMVEDNLPGTLITDSMASFLMAQG 248          
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: A0A8C4R1L2_EPTBU (Methylthioribose-1-phosphate isomerase n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4R1L2_EPTBU)

HSP 1 Score: 101 bits (252), Expect = 4.310e-24
Identity = 49/67 (73.13%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQ 67
            G+LAT G+GTALGV+R L E G LE  +CTETRPYNQGARLTAYE VAEG PG L+ DSA AF MAQ
Sbjct:  168 GALATCGYGTALGVVRALHEAGTLERVYCTETRPYNQGARLTAYELVAEGIPGTLLADSAVAFAMAQ 234          
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: A0A8C4R244_EPTBU (Methylthioribose-1-phosphate isomerase 1 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4R244_EPTBU)

HSP 1 Score: 101 bits (252), Expect = 6.810e-24
Identity = 49/67 (73.13%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQ 67
            G+LAT G+GTALGV+R L E G LE  +CTETRPYNQGARLTAYE VAEG PG L+ DSA AF MAQ
Sbjct:  208 GALATCGYGTALGVVRALHEAGTLERVYCTETRPYNQGARLTAYELVAEGIPGTLLADSAVAFAMAQ 274          
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: A0A8J4YM75_CHIOP (Methylthioribose-1-phosphate isomerase n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4YM75_CHIOP)

HSP 1 Score: 100 bits (248), Expect = 1.500e-23
Identity = 50/67 (74.63%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQ 67
            GSLATAG+GTALGV+R L E G LE  +CTETRPYNQGARLTAYE V EG PG LI DSAAA LM +
Sbjct:  168 GSLATAGYGTALGVVRALQEAGRLERVYCTETRPYNQGARLTAYELVCEGLPGTLICDSAAAALMRE 234          
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: A0A5B7ELZ2_PORTR (Methylthioribose-1-phosphate isomerase n=3 Tax=Portunidae TaxID=6757 RepID=A0A5B7ELZ2_PORTR)

HSP 1 Score: 98.6 bits (244), Expect = 5.890e-23
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQ 67
            GSLATAG+GTALGV+R L E G LE  +CTETRPYNQG+RLTA+E VAEG PG LI DSAAA LM +
Sbjct:  168 GSLATAGYGTALGVVRALQEAGRLEHVYCTETRPYNQGSRLTAFELVAEGLPGTLICDSAAAALMKE 234          
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: A0A150H0Q5_GONPE (Methylthioribose-1-phosphate isomerase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H0Q5_GONPE)

HSP 1 Score: 100 bits (248), Expect = 6.540e-23
Identity = 51/68 (75.00%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQG 68
            GSLATAGFGTALGVIR L E+GLLE  FCTETRPYNQGARLTA+E   +G P  LI DSAAA LM  G
Sbjct:  185 GSLATAGFGTALGVIRALHERGLLEHAFCTETRPYNQGARLTAFELAHDGLPATLICDSAAAALMGTG 252          
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: A0A7R9TVX8_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TVX8_9VIRI)

HSP 1 Score: 95.9 bits (237), Expect = 1.750e-22
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQG 68
            GSLATAG+GTALG IR L E+G+L+  +  ETRPYNQG RLTAYE VA+G PG LI DSAAA +MA G
Sbjct:   75 GSLATAGYGTALGCIRALHERGMLKRVYACETRPYNQGGRLTAYEIVADGLPGTLIADSAAAAMMASG 142          
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Match: A0A7J7PGQ8_9CHLO (Methylthioribose-1-phosphate isomerase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PGQ8_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 2.270e-22
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    1 GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEGFPGKLIPDSAAAFLMAQG 68
            GSLATAG+GTALGV+R L E+G LE C+  ETRPYNQGARLTA+E V +G P  L+ DSAAA LMAQG
Sbjct:  184 GSLATAGYGTALGVVRALHEQGKLERCYACETRPYNQGARLTAFELVHDGLPATLLVDSAAAALMAQG 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45640.11443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD08_9PHAE2.750e-3186.96Reverse transcriptase domain-containing protein n=... [more]
D7FTE3_ECTSI9.330e-3186.76Methylthioribose-1-phosphate isomerase n=1 Tax=Ect... [more]
A0A835YPH9_9STRA3.970e-2475.00Methylthioribose-1-phosphate isomerase n=1 Tax=Tri... [more]
A0A8C4R1L2_EPTBU4.310e-2473.13Methylthioribose-1-phosphate isomerase n=1 Tax=Ept... [more]
A0A8C4R244_EPTBU6.810e-2473.13Methylthioribose-1-phosphate isomerase 1 n=1 Tax=E... [more]
A0A8J4YM75_CHIOP1.500e-2374.63Methylthioribose-1-phosphate isomerase n=1 Tax=Chi... [more]
A0A5B7ELZ2_PORTR5.890e-2373.13Methylthioribose-1-phosphate isomerase n=3 Tax=Por... [more]
A0A150H0Q5_GONPE6.540e-2375.00Methylthioribose-1-phosphate isomerase n=1 Tax=Gon... [more]
A0A7R9TVX8_9VIRI1.750e-2269.12Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A7J7PGQ8_9CHLO2.270e-2270.59Methylthioribose-1-phosphate isomerase n=1 Tax=Sce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 9..67
e-value: 6.2E-12
score: 45.3
IPR042529Initiation factor 2B-like, C-terminalGENE3D3.40.50.10470coord: 9..67
e-value: 3.3E-19
score: 71.2
NoneNo IPR availablePANTHERPTHR43475FAMILY NOT NAMEDcoord: 1..68
NoneNo IPR availablePANTHERPTHR43475:SF1METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASEcoord: 1..68
IPR037171NagB/RpiA transferase-likeSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45640contigH-paniculata_contig45640:260..1031 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45640.11443.1mRNA_H-paniculata_contig45640.11443.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45640 260..1031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45640.11443.1 ID=prot_H-paniculata_contig45640.11443.1|Name=mRNA_H-paniculata_contig45640.11443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
GSLATAGFGTALGVIRTLSEKGLLEACFCTETRPYNQGARLTAYEFVAEG
FPGKLIPDSAAAFLMAQGVFRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000649IF-2B-related
IPR042529IF_2B-like_C
IPR037171NagB/RpiA_transferase-like