prot_H-paniculata_contig45628.11440.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 4.500e-22 Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 0
Query: 3 TLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLPPEFS---PFSRDIPSVRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVGR-REKVDEFKHNIS 131
T+R + ++A D EL M VD AY+ + +EE+++VK PP + P ++ V RL KSLYGLKQSGRNW+ + + G G S+ D LY GE L++ +YV+DL+I G R+ VD+FK IS
Sbjct: 66 TIRLILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEM-LVIVLYVDDLIIAGNSRDMVDDFKQAIS 195
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.720e-21 Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = 0
Query: 3 TLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLPPEFSPF-SRDIPSVRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVGR-REKVDEFKHNIS 131
T+R V +LA D EL M V+ AY+ + +EE+++VK PP + + S V RL KSLYGLKQSGRNW+ + + G G S+ D LY GE L++ +YV+DL+I RE V +FKH IS
Sbjct: 66 TIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAIS 195
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 4.980e-20 Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 0
Query: 1 MWTLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLPPEFSPFSRDIPS-VRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVGR-REKVDEFKHNIS 131
M T+R V +LA D EL M VD AY+ + +EE++++K PP + + + V RL KSLYGLKQSGRNW+ + + G GL S D LY GE L++ +YV+DL+I R D+FK +IS
Sbjct: 284 MTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDIS 415
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: W7T0T3_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0T3_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.520e-20 Identity = 54/131 (41.22%), Postives = 78/131 (59.54%), Query Frame = 0
Query: 3 TLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLPPEFSPF-SRDIPSVRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVGR-REKVDEFKHNIS 131
T+R + ++A D EL M V+ AY+ + +EE+++VK P + + S V RL KSLYGLKQSGRNW+ + + G G S+ D LY GE L++ +YV+DL+I RE V++FKH IS
Sbjct: 506 TIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVNKFKHAIS 635
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: W7TWT0_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWT0_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.620e-19 Identity = 52/135 (38.52%), Postives = 82/135 (60.74%), Query Frame = 0
Query: 1 MWTLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLP---PEFSPFSRDIPSVRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVGR-REKVDEFKHNIS 131
M T+R + +LA D EL M V+ AY+ + +EE++++K P ++ P ++ V RL KSLYGLKQSGRNW+ + + G G S+ D LY GE L++ +YV+DL+I G+ R+ +++FK +S
Sbjct: 255 MTTIRLILALACILDSELDNMDVETAYLQSDLEEKVYIKQPIGYEQYGPNGEEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEI-LVIVLYVDDLIITGKSRDMINDFKLAVS 386
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 92.0 bits (227), Expect = 4.260e-19 Identity = 47/131 (35.88%), Postives = 80/131 (61.07%), Query Frame = 0
Query: 3 TLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLPPEFSPFSRD-IPSVRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVGRR-EKVDEFKHNIS 131
++R + LAA+++ + M V A+++ P++ E+F++ P F S + + V RL KSLYGLKQSGRNWN L ++L+ G R+ D +Y + GE ++V ++V+DL+I +K+ +FK N+
Sbjct: 261 SIRILMQLAAQYNLTVHQMDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVY--QKQTGEDIIIVVIWVDDLIIASSNTDKISQFKENMK 389
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 6.150e-19 Identity = 53/131 (40.46%), Postives = 77/131 (58.78%), Query Frame = 0
Query: 3 TLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLPPEFSPFSRDIPS-VRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVGR-REKVDEFKHNIS 131
T+R + ++A D EL M V+ AY+ + +EE+++VK P + + + V RL KSLYGLKQSGRNW+ + + G G S+ D LY GE L++ +YV+DL+I RE VD+FK IS
Sbjct: 295 TIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGLNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVIVLYVDDLIITSNSREMVDKFKQAIS 424
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 6.160e-19 Identity = 56/135 (41.48%), Postives = 78/135 (57.78%), Query Frame = 0
Query: 1 MWTLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLP---PEFSPFSRDIPSVRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVGR-REKVDEFKHNIS 131
M T+R V +LA D EL M VD AY+ + +EE++++K P ++ P ++ V RL KSLYGLKQSGRNW+ + + G G S+ D LY GE L+V +YV+DL+I R D+FK IS
Sbjct: 582 MTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPHGYEKYGPNGGEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVVVLYVDDLIIASNSRTMADKFKQAIS 713
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: A0A7D9HG25_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HG25_PARCT) HSP 1 Score: 91.3 bits (225), Expect = 6.500e-19 Identity = 47/131 (35.88%), Postives = 79/131 (60.31%), Query Frame = 0
Query: 3 TLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLPPEFSPFSRD-IPSVRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVGRR-EKVDEFKHNIS 131
++ + LAA++D + M V A+++ P++ E+F++ P F S + + V RL KSLYGLKQSGRNWN L ++L+ G R+ D +Y + GE ++V ++V+DL+I +K+ +FK N+
Sbjct: 236 SITILMQLAAQYDLTVHQMDVKTAFLHAPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFVRNPVDHCVY--QKQTGEDIIIVVIWVDDLIIASSNTDKIRQFKENMK 364
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Match: W7T9Y7_9STRA (Retrotransposon ty1-copia subclass n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9Y7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 7.880e-19 Identity = 48/119 (40.34%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 3 TLRTVFSLAAEHDFELQGMGVDAAYVNTPVEEELFVKLPP---EFSPFSRDIPSVRRLCKSLYGLKQSGRNWNNTLHDFLVGIGLQRSTTDSRLYFSRDDGGETNLLVAVYVNDLVIVG 118
T+R + ++A D EL M VD AY+ + +EE+++VK PP ++ P ++ V L KSLYGLKQSG NW+ + + G G S+TD LY GE L++ +YV+DL+I G
Sbjct: 50 TIRLILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQYGPNGEEL--VCLLHKSLYGLKQSGINWHKKIDGWFRGYGFHSSSTDPCLYVKFGSSGEI-LVIVLYVDDLIIAG 165 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45628.11440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig45628.11440.1 ID=prot_H-paniculata_contig45628.11440.1|Name=mRNA_H-paniculata_contig45628.11440.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bpback to top |