prot_H-paniculata_contig4562.11438.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4562.11438.1
Unique Nameprot_H-paniculata_contig4562.11438.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length633
Homology
BLAST of mRNA_H-paniculata_contig4562.11438.1 vs. uniprot
Match: D8LL83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL83_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.170e-33
Identity = 82/148 (55.41%), Postives = 97/148 (65.54%), Query Frame = 0
Query:  448 FSIWK-GARCVVCNRVAKLGCSASSCFDCCVKSGTACEAHAKRLERKQREDELLAAPATHG--------------SGGSEGGIDED-----ARLPKGAFKEVSFHATGETATLWCLKDFVCGQEAQAAMESLTRTER--ADRLAIYRG 573
            F +W+ G+RC +C R AKLGCS+ SCF+CC+KSG  CEAHAK++ERK REDELL                     S G  GG  +D     ARLP GAFKE +F ATGETATLWCLKDFVCG++ Q AME+L RTER  A R A +RG
Sbjct:  366 FRVWESGSRCGLCGRKAKLGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXGSCGLMSPGLPGGAFDDGAAPRARLPPGAFKEAAFQATGETATLWCLKDFVCGKDTQTAMETLNRTERQKAGRSANHRG 513          
BLAST of mRNA_H-paniculata_contig4562.11438.1 vs. uniprot
Match: A0A6H5JLF6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF6_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 4.810e-26
Identity = 73/145 (50.34%), Postives = 88/145 (60.69%), Query Frame = 0
Query:  448 FSIWK-GARCVVCNRVAKLG-------CSASSCFDCCVKSGTACEAHAKRLERKQREDELLAAPATHG----------------SGGSEGGIDED-----ARLPKGAFKEVSFHATGETATLWCLKDFVCGQEAQAAMESLTRTE 563
            F +W+ G+RC +C R +KLG       CS+ SCF+CC+KSG  CEAHAK++ERK REDELL                       S G  GG  +D     ARLP GAFKE +F   GETATLWCLKDFVCG++ Q AME+L RTE
Sbjct:  612 FRVWESGSRCGLCGRKSKLGQLLEGAGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXXXXXGGLMSPGLPGGAFDDGTAPRARLPPGAFKEAAFQ--GETATLWCLKDFVCGKDTQTAMETLNRTE 754          
BLAST of mRNA_H-paniculata_contig4562.11438.1 vs. uniprot
Match: D8LNI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI0_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 3.290e-21
Identity = 57/112 (50.89%), Postives = 73/112 (65.18%), Query Frame = 0
Query:  455 RCVVCN-RVAKLGCSASSCFDCCVKSGTACEAHAKRLERKQREDELLAAPATHGSGGSEGGIDEDARLPKGAFKEVSFHATGETATLWCLKDFVCGQEAQAAMESLTRTERA 565
            RC +C  R+ + GC+  SC DCC KS   C AHAK+L+RK+ E+ELL+A      G S+  I E  R  K  FKE SFHA G+TAT+WC  DF+C +  QAA  SL+RT+RA
Sbjct:  382 RCKICKTRLGRAGCTTGSCLDCCFKSALPCGAHAKQLQRKRLEEELLSA------GPSQSQIREKQRNIKDIFKEESFHAIGDTATVWCFLDFLCAKSNQAAFTSLSRTQRA 487          
BLAST of mRNA_H-paniculata_contig4562.11438.1 vs. uniprot
Match: A0A6H5JZT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT8_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 6.800e-17
Identity = 51/100 (51.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:  466 GCSASSCFDCCVKSGTACEAHAKRLERKQREDELLAAPATHGSGGSEGGIDEDARLPKGAFKEVSFHATGETATLWCLKDFVCGQEAQAAMESLTRTERA 565
            GC+  SC DCC KS   C AHAK+L+RK+ E+ELL+A        S+  I E  R  K  FKE SFHA G+T T+WC  DFV  +  QAA  SL+RT+RA
Sbjct:  796 GCTTGSCLDCCFKSALPCAAHAKQLQRKRLEEELLSAKP------SQSQIREKQRNIKDTFKEESFHAIGDTVTVWCFLDFVRAKSNQAAFTSLSRTQRA 889          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4562.11438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LL83_ECTSI1.170e-3355.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLF6_9PHAE4.810e-2650.34Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LNI0_ECTSI3.290e-2150.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZT8_9PHAE6.800e-1751.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4562contigH-paniculata_contig4562:3342..10334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4562.11438.1mRNA_H-paniculata_contig4562.11438.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4562 3342..10334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4562.11438.1 ID=prot_H-paniculata_contig4562.11438.1|Name=mRNA_H-paniculata_contig4562.11438.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=633bp
KRKSKSVVAKARSDTSSGSGSSSSSSSSSKVVDYRNSLISTAGCSSARRG
GKGVPLRLAKSKAAPANAELGSDTSGRVRKRTEEDEKEAEEASAKPTCTT
PQCLEISCHKHPSFGFLGGRREYCREHGHPGMVNLVHLGKKVRMLKLQLE
KKGRAAKGMVIDKTSLVAQIPGKLQRKRKRQSGGDDGHGRPASSSPTRKK
ACAGGSSTNSGGKGTSSSRVPKKHKTLHASSPVDVDLGAGTGSDKGKVDG
PLARHGSGVGGSGGPAKGSGKGKGKGKVIRSLSGLQAGPGKGSKAKSEEK
VVKSLGRLAAEDVASAAVATAATSARMDRKPRAGSGGGDAAMKQGCGKKF
TSGGTAAEVTGQAGGKSMKSKRSADPPVPDVGSPLKKVKKVRGVVLDGNP
EDVAGKRRHDLCWDAGSSRASGRASRGSSGDGDGGGGSDGRTTHFGGFSI
WKGARCVVCNRVAKLGCSASSCFDCCVKSGTACEAHAKRLERKQREDELL
AAPATHGSGGSEGGIDEDARLPKGAFKEVSFHATGETATLWCLKDFVCGQ
EAQAAMESLTRTERADRLAIYRGEVDALAKTTRWSSASGAFSNDHAAAAM
HRAVGGRCSGQRFAGRTMAGASVAAASGAREKV
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