prot_H-paniculata_contig45604.11437.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45604.11437.1
Unique Nameprot_H-paniculata_contig45604.11437.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length78
Homology
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BLAST of mRNA_H-paniculata_contig45604.11437.1 vs. uniprot
Match: D8LIN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN5_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 7.460e-26
Identity = 54/78 (69.23%), Postives = 62/78 (79.49%), Query Frame = 0 
Query:    1 QAFQQLQQAFVAFMLTILVHFVVGIQPILLLQLFSTPYNFVENRLFRKHVLGLKPGYRVWGERLEAELRPEQISKAVE 78
            + FQQLQQ FVA MLTIL HFV+G +PILLLQ+FS PY+F ENRL RK VLGLKPGYRVWGER E EL  +++ K  E
Sbjct:  101 EVFQQLQQQFVALMLTILAHFVLGFRPILLLQIFSAPYHFSENRLLRKLVLGLKPGYRVWGERFEGELEGDKVKKEEE 178
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BLAST of mRNA_H-paniculata_contig45604.11437.1 vs. uniprot
Match: A0A6H5K295_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K295_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 7.200e-21
Identity = 46/65 (70.77%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:   14 MLTILVHFVVGIQPILLLQLFSTPYNFVENRLFRKHVLGLKPGYRVWGERLEAELRPEQISKAVE 78
            MLTIL HFV+G +PILLLQ+FSTPY+F ENRL RK VLGLKPGYRVWGER+E EL   +I    E
Sbjct:    1 MLTILAHFVLGFRPILLLQIFSTPYHFSENRLLRKFVLGLKPGYRVWGERIEGELEGGKIKNEEE 65
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45604.11437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIN5_ECTSI7.460e-2669.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K295_9PHAE7.200e-2170.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..78
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45604contigH-paniculata_contig45604:1162..1395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45604.11437.1mRNA_H-paniculata_contig45604.11437.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45604 1162..1395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45604.11437.1 ID=prot_H-paniculata_contig45604.11437.1|Name=mRNA_H-paniculata_contig45604.11437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
QAFQQLQQAFVAFMLTILVHFVVGIQPILLLQLFSTPYNFVENRLFRKHV
LGLKPGYRVWGERLEAELRPEQISKAVE
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