prot_H-paniculata_contig4550.11420.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4550.11420.1
Unique Nameprot_H-paniculata_contig4550.11420.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length194
Homology
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: D8LQV4_ECTSI (Trafficking protein particle complex subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV4_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 8.540e-117
Identity = 173/193 (89.64%), Postives = 180/193 (93.26%), Query Frame = 0
Query:    1 MSASSKSHQRTGEQAWSKIGKVNAELFTLTYGAMVMQLIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQYSGLLYSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKEA 193
            M+ SSKSHQRTGEQAW KI KVNAELFTLTYGAMVMQLIQDFEDV AVNKQLE+MGYNIGVRLIDEFLAK+ VS P  CTDLKETADV+AKVAFKMFLGVTADV+SWN D TAFSLLL+DNPL EFVELPPQYSGLLYSNLLCGVIRGALEMVQMKV CRCVRDVLRGDDVNEIRVELKEMMEDVMDE+YKE 
Sbjct:    1 MATSSKSHQRTGEQAWGKISKVNAELFTLTYGAMVMQLIQDFEDVGAVNKQLESMGYNIGVRLIDEFLAKAGVSTP--CTDLKETADVVAKVAFKMFLGVTADVSSWNGDGTAFSLLLYDNPLIEFVELPPQYSGLLYSNLLCGVIRGALEMVQMKVSCRCVRDVLRGDDVNEIRVELKEMMEDVMDEDYKEG 191          
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: A0A835ZIA0_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIA0_9STRA)

HSP 1 Score: 279 bits (713), Expect = 2.470e-93
Identity = 140/193 (72.54%), Postives = 162/193 (83.94%), Query Frame = 0
Query:    1 MSASSKSHQRTGEQAWSKIGKVNAELFTLTYGAMVMQLIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQYSGLLYSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKEA 193
            M+ S K H R GEQAW+K+ KVNAE F LTYGAMVMQL+QDFED  AVN QL+TMGYNIGVRLIDEFLAKS     G C DL++TA+ IAKVAFKMFLGV A+VA+WN+D TAFS++L+DNPL EFVELPPQ+  LLYSN+LCGVIRGALEMVQMKV CR  RDVLRGDD+NEIRVELKE++ + MD++Y E 
Sbjct:    1 MATSGKQHTRLGEQAWNKMSKVNAEFFALTYGAMVMQLVQDFEDTAAVNAQLDTMGYNIGVRLIDEFLAKSGT---GACADLRDTAETIAKVAFKMFLGVVAEVANWNADGTAFSVVLYDNPLIEFVELPPQHCELLYSNVLCGVIRGALEMVQMKVECRFARDVLRGDDLNEIRVELKEVLAEQMDDQYFEG 190          
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: A0A7S2SEE0_9STRA (Trafficking protein particle complex subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEE0_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.380e-85
Identity = 124/188 (65.96%), Postives = 158/188 (84.04%), Query Frame = 0
Query:    5 SKSHQRTGEQAWSKIGKVNAELFTLTYGAMVMQLIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQYSGLLYSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKE 192
            SKSH R GEQAW++  KVN E F +TYGA+VMQ+I+D EDV+ VNKQLE +GYNIGVR+IDEFLAKS   +PG C   +ETAD IAKVAFKMFLG+TADV SWN++ ++F L  ++NPLTEFVELP +Y+GL+YSN+LCG IRGALEM+Q++  C+ VRD L+GDDVNEI+VE++E+ME+VM E+YK+
Sbjct:    3 SKSHVRVGEQAWARTPKVNGEFFAMTYGALVMQIIEDHEDVDLVNKQLEKIGYNIGVRIIDEFLAKSG--LPGPCQSHRETADSIAKVAFKMFLGITADVTSWNAERSSFCLTFYENPLTEFVELPAEYTGLVYSNILCGAIRGALEMIQVRAQCKFVRDTLKGDDVNEIQVEIQEVMEEVMSEDYKD 188          
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: A0A7S2DLH0_9STRA (Trafficking protein particle complex subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLH0_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.900e-85
Identity = 133/190 (70.00%), Postives = 158/190 (83.16%), Query Frame = 0
Query:    3 ASSKSHQRTGEQAWSKIGKVNAELFTLTYGAMVMQLIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQYSGLLYSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKE 192
            ASSKS+ RTGEQ W+K+ K+N ELF LTYGAMVMQLI+D+E V+ VNKQLE MGYNIG+RLIDEFLAKS V +   C + +ETADVIAKVAFKMFLGVTADV +WNS  T+FSL L DNPLTEF+ELPP Y+GL+YSN LCG IRGALEMVQ++  CR VRD LRGD+VNEI+VE+ E +E+ M E+Y +
Sbjct:    1 ASSKSYARTGEQTWNKMPKMNGELFALTYGAMVMQLIKDYEGVDEVNKQLEKMGYNIGIRLIDEFLAKSGVGV--NCQNPQETADVIAKVAFKMFLGVTADV-TWNSQHTSFSLTLFDNPLTEFIELPPAYNGLIYSNALCGAIRGALEMVQIRAQCRIVRDTLRGDEVNEIQVEILEHIEESMGEDYND 187          
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: F0YEM0_AURAN (Trafficking protein particle complex subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEM0_AURAN)

HSP 1 Score: 257 bits (657), Expect = 7.710e-85
Identity = 134/193 (69.43%), Postives = 156/193 (80.83%), Query Frame = 0
Query:    1 MSASSKSHQRTGEQAWSKIGKVNAELFTLTYGAMVMQLIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQYSGLLYSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKEA 193
            MSASSKSH R GEQ W+K+ K+NAE F LTYG MV+QL++DFEDV  VNK+LE+MG+ IG+RLIDEFLAKS ++    C D  ET DVIAKVAFKMFLGV  DVA+WN+D TA SLLL+DNPL +FVE+PP  + LLYSN+LCGVIRGALEM+ MKV    VRDVLRGDDVNEIRVELKE M   MD++YKE 
Sbjct:    1 MSASSKSHARIGEQVWAKMPKINAEFFCLTYGTMVVQLMKDFEDVREVNKKLESMGHGIGMRLIDEFLAKSGIN---NCHDFSETCDVIAKVAFKMFLGVGVDVANWNADKTACSLLLYDNPLNDFVEIPPN-TNLLYSNILCGVIRGALEMIMMKVDAFFVRDVLRGDDVNEIRVELKERMVSEMDDQYKEG 189          
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: A0A7S2V4X7_9STRA (Trafficking protein particle complex subunit n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4X7_9STRA)

HSP 1 Score: 253 bits (645), Expect = 3.110e-83
Identity = 126/176 (71.59%), Postives = 154/176 (87.50%), Query Frame = 0
Query:   19 IGKVNAELFTLTYGAMVMQLIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQY-SGLLYSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKEA 193
            +GKVNAELF+LTYG+MVMQLI+D+EDVNAVN QLE MGYN+GVRLIDEFLAKS +++   C D +ET +VIAKVAFKMFLG+ A+ + WN++ TAFSL+  DNPLTEFVELPPQ+ S LLYSNLLCGVIRGALEMVQ+++ CR VRDVL+GD+VNEIR+ELKE +ED+  E+YKE+
Sbjct:    1 MGKVNAELFSLTYGSMVMQLIEDYEDVNAVNIQLEKMGYNMGVRLIDEFLAKSGLTV--SCQDFRETGEVIAKVAFKMFLGLGAEASQWNNEGTAFSLVFPDNPLTEFVELPPQFASSLLYSNLLCGVIRGALEMVQIRIECRFVRDVLQGDEVNEIRIELKEFLEDIAGEDYKES 174          
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: K3WM83_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM83_GLOUD)

HSP 1 Score: 252 bits (644), Expect = 7.580e-83
Identity = 129/191 (67.54%), Postives = 159/191 (83.25%), Query Frame = 0
Query:    3 ASSKSHQRTGEQAWSKIGKVNAELFTLTYGAMVMQLIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQYSGLL-YSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKE 192
            A+ + HQR G+ AW+K+ KVN ELF LTYGAMV QLI+DFED+ AVN+QL+ MGYNIG+RLIDEFLAKS VS    C D KETA+VIAK+AFKMFLGV A+VA WN++  A SLL+++NPLTEFVELPP   G+L YSN+LCGV+RGALEMVQM+V  R V+DVL+GD+V+EIR+ELK M+E+ M +EYKE
Sbjct:    2 ATPRPHQRVGDVAWTKMTKVNGELFALTYGAMVTQLIRDFEDLKAVNQQLDNMGYNIGIRLIDEFLAKSGVS---NCQDFKETAEVIAKIAFKMFLGVNAEVAHWNAENNACSLLIYENPLTEFVELPPSAYGVLWYSNVLCGVLRGALEMVQMRVEARFVKDVLQGDEVSEIRLELKGMIEEAMGDEYKE 189          
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: W7TW04_9STRA (Trafficking protein particle complex subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW04_9STRA)

HSP 1 Score: 252 bits (644), Expect = 8.390e-83
Identity = 122/192 (63.54%), Postives = 158/192 (82.29%), Query Frame = 0
Query:    2 SASSKSHQRTGEQAWSKIGKVNAELFTLTYGAMVMQLIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQYSGLLYSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKEA 193
            S+S  +  R G+QAW+K+ K+NAELF LTYGAMVMQLI+D+EDV AVN+QLETMGY+IG +L+DEFLAKS V   G C + +E A+ +AKV FKMFLGV  +V +WN++ TAFSL ++DNPL +FVELPPQYSGL+YSN+LCGVIRGALEM++ +V CR V+D L+GD+VNEIRVEL++M+++   EEY E 
Sbjct:    4 SSSRSAATRAGDQAWTKMSKMNAELFNLTYGAMVMQLIRDYEDVQAVNQQLETMGYSIGQKLVDEFLAKSGV---GNCANFREVAETLAKVGFKMFLGVVVEVTAWNAEGTAFSLQVYDNPLADFVELPPQYSGLVYSNILCGVIRGALEMIKYQVECRFVKDGLKGDEVNEIRVELRQMVDESFGEEYNEG 192          
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: M4B220_HYAAE (Trafficking protein particle complex subunit n=26 Tax=Peronosporaceae TaxID=4777 RepID=M4B220_HYAAE)

HSP 1 Score: 251 bits (640), Expect = 3.080e-82
Identity = 125/186 (67.20%), Postives = 156/186 (83.87%), Query Frame = 0
Query:    8 HQRTGEQAWSKIGKVNAELFTLTYGAMVMQLIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQYSGLL-YSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKE 192
            HQR G+ AWSKI KVN ELF LTYG++V QL++DFED+  VN+QL+ MGYNIGVRL+DEFLAKS V+    C D KETA+V+AKVAFKMFLG++ DV+ WN++ TA SLLL+DNPLTEFVELPP   G+L YSN+LCGV+RGALEMVQM+V  + V+DVL+GD+V+E+R+ELK M+ED M +EYKE
Sbjct:    7 HQRLGDTAWSKIPKVNGELFALTYGSLVTQLVKDFEDLKVVNEQLDKMGYNIGVRLVDEFLAKSGVTT---CQDFKETAEVVAKVAFKMFLGISVDVSQWNAEGTACSLLLYDNPLTEFVELPPSAYGVLWYSNVLCGVLRGALEMVQMRVEVQFVKDVLQGDEVSEMRLELKGMIEDAMGDEYKE 189          
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Match: A0A024G2B4_9STRA (Trafficking protein particle complex subunit n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2B4_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.180e-76
Identity = 126/203 (62.07%), Postives = 151/203 (74.38%), Query Frame = 0
Query:    9 QRTGEQAWSKIGKVNAELFTLTYGAMVMQ------------------LIQDFEDVNAVNKQLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGVTADVASWNSDATAFSLLLHDNPLTEFVELPPQ-YSGLLYSNLLCGVIRGALEMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKE 192
            QR GE AW+K  KVN E F LTYGAMV Q                  LI+D+ED+ AVN QL+ MGYNIG+RLIDEFLAKS V+    CTD KETADVI+KVAFKMFLG+T +V++WNS+ +  SLL+HDNPLTEFVELPP  Y  L YSN+LCGV+RGALEMVQM+V  R ++DVL+GDDV EIR+ELK  +E+ M +EYKE
Sbjct:    8 QRIGELAWNKATKVNGEFFALTYGAMVTQVQRKDLRSPQLNLRRVPQLIKDYEDLKAVNHQLDQMGYNIGIRLIDEFLAKSGVT---SCTDFKETADVISKVAFKMFLGITTEVSNWNSENSVCSLLIHDNPLTEFVELPPSAYGELWYSNILCGVLRGALEMVQMRVEARFLKDVLQGDDVTEIRLELKGTIEETMGDEYKE 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4550.11420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQV4_ECTSI8.540e-11789.64Trafficking protein particle complex subunit n=1 T... [more]
A0A835ZIA0_9STRA2.470e-9372.54Trafficking protein particle complex subunit n=1 T... [more]
A0A7S2SEE0_9STRA1.380e-8565.96Trafficking protein particle complex subunit n=1 T... [more]
A0A7S2DLH0_9STRA1.900e-8570.00Trafficking protein particle complex subunit n=1 T... [more]
F0YEM0_AURAN7.710e-8569.43Trafficking protein particle complex subunit n=1 T... [more]
A0A7S2V4X7_9STRA3.110e-8371.59Trafficking protein particle complex subunit n=1 T... [more]
K3WM83_GLOUD7.580e-8367.54Trafficking protein particle complex subunit n=1 T... [more]
W7TW04_9STRA8.390e-8363.54Trafficking protein particle complex subunit n=2 T... [more]
M4B220_HYAAE3.080e-8267.20Trafficking protein particle complex subunit n=26 ... [more]
A0A024G2B4_9STRA1.180e-7662.07Trafficking protein particle complex subunit n=1 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016721Bet3 familyPIRSFPIRSF018293TRAPP_1_Bet3coord: 4..191
e-value: 4.5E-79
score: 261.8
IPR016721Bet3 familyPANTHERPTHR13048TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3coord: 8..187
NoneNo IPR availableGENE3D3.30.1380.20coord: 1..190
e-value: 3.8E-75
score: 253.2
NoneNo IPR availablePANTHERPTHR13048:SF0TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITcoord: 8..187
IPR007194Transport protein particle (TRAPP) componentPFAMPF04051TRAPPcoord: 27..176
e-value: 1.0E-37
score: 129.1
IPR024096NO signalling/Golgi transport ligand-binding domain superfamilySUPERFAMILY111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 21..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4550contigH-paniculata_contig4550:2540..14730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4550.11420.1mRNA_H-paniculata_contig4550.11420.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4550 2280..15696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4550.11420.1 ID=prot_H-paniculata_contig4550.11420.1|Name=mRNA_H-paniculata_contig4550.11420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp
MSASSKSHQRTGEQAWSKIGKVNAELFTLTYGAMVMQLIQDFEDVNAVNK
QLETMGYNIGVRLIDEFLAKSNVSMPGGCTDLKETADVIAKVAFKMFLGV
TADVASWNSDATAFSLLLHDNPLTEFVELPPQYSGLLYSNLLCGVIRGAL
EMVQMKVVCRCVRDVLRGDDVNEIRVELKEMMEDVMDEEYKEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016721Bet3
IPR007194TRAPP_component
IPR024096NO_sig/Golgi_transp_ligand-bd