prot_H-paniculata_contig4545.11412.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4545.11412.1
Unique Nameprot_H-paniculata_contig4545.11412.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length193
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4545.11412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 2..54
e-value: 0.0065
score: 25.7
NoneNo IPR availableGENE3D1.10.10.60coord: 1..50
e-value: 6.6E-10
score: 40.6
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 2..50
e-value: 9.4E-9
score: 35.4
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..56
score: 9.581
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4545contigH-paniculata_contig4545:4032..14996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4545.11412.1mRNA_H-paniculata_contig4545.11412.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4545 3692..14996 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4545.11412.1 ID=prot_H-paniculata_contig4545.11412.1|Name=mRNA_H-paniculata_contig4545.11412.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MWSAKEDEKLRKIVKETGLDDWTKLGDWSEAAAAVGGGKTPQQCFNRWQE
ETQMMAEGYYGDQGSGSGAGRGSGYVGAQQQYEQYPPQTGPGYGFYQQQS
ASRSTLPPLGSTDQRNPAQGQQQAFRLPGGYWGPAAAGGSEESYPPSAGA
GMRPWPREPQVNPHLSGRSWAHPSPAGMPPYVYGYGSSSGAGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf