prot_H-paniculata_contig45354.11395.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A6D2JUM8_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JUM8_9BRAS) HSP 1 Score: 62.8 bits (151), Expect = 1.330e-8 Identity = 50/146 (34.25%), Postives = 73/146 (50.00%), Query Frame = 0
Query: 1 RCHRCDQIGHVHTQCTARVTLS-----TDPNPPQCGL----PVALTNQNPTINNGNIWVSDSGASNHMTNDLSKIYDLRKPVAGEDVVMLGDGSTLVVDLVGKLHLIIHSTTDVPATL-EVSYLPELNFNLFSLHKIQGKYPISLD 136
RC C GH +C+ ++ LS T P P Q P A PT N N WV DSGA++H+T DLS + L +P G + V + DG+ L + G L T P TL +V Y+P+L NL S++++ +S++
Sbjct: 60 RCQICGVHGHSARRCS-QINLSGGFLGTQPRPQQPTSAPWQPRANLASTPTYNANN-WVMDSGATHHLTTDLSNL-SLHQPYLGGEEVTIADGTNLHISHTGSSQL---PTLSKPLTLTDVLYVPDLKKNLISVYRLCNANRVSVE 199
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A6D2KMT9_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KMT9_9BRAS) HSP 1 Score: 62.8 bits (151), Expect = 1.550e-8 Identity = 50/146 (34.25%), Postives = 73/146 (50.00%), Query Frame = 0
Query: 1 RCHRCDQIGHVHTQCTARVTLS-----TDPNPPQCGL----PVALTNQNPTINNGNIWVSDSGASNHMTNDLSKIYDLRKPVAGEDVVMLGDGSTLVVDLVGKLHLIIHSTTDVPATL-EVSYLPELNFNLFSLHKIQGKYPISLD 136
RC C GH +C+ ++ LS T P P Q P A PT N N WV DSGA++H+T DLS + L +P G + V + DG+ L + G L T P TL +V Y+P+L NL S++++ +S++
Sbjct: 278 RCQICGVHGHSARRCS-QINLSGGFLGTQPRPQQPTSAPWQPRANLASTPTYNANN-WVMDSGATHHLTTDLSNL-SLHQPYLGGEEVTIADGTNLHISHTGSSQL---PTLSKPLTLTDVLYVPDLKKNLISVYRLCNANRVSVE 417
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A5E4G702_PRUDU (PREDICTED: Retrovirus-related Pol poly from (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4G702_PRUDU) HSP 1 Score: 62.4 bits (150), Expect = 2.000e-8 Identity = 44/150 (29.33%), Postives = 74/150 (49.33%), Query Frame = 0
Query: 2 CHRCDQIGHVHTQCTARVTLSTDPN--PPQCGLPVALTNQNPTINNGNIWVSDSGASNHMTNDLSKIYDLRKPVAGEDVVMLGDGSTLVVDLVGKLHLIIHSTTDVPATLEVSYLPELNFNLFSLHKIQGKYPISL--DAAGTHINNKLS 147
C C++ GH C R+ LS + N P + P A + N+W++DSGASNH+T+++S + P G + + +GDG++L + I+H++ L V ++P++ NL S+HK SL D G I + +
Sbjct: 69 CQICERKGHSALTCRQRLNLSYNANVVPARFQAPSAHYAHSAFPPTDNLWLADSGASNHVTSNMSNLGH-SSPYTGSETLRVGDGNSLPISHTRST--ILHTSNAKFHLLNVLHVPQVAHNLLSVHKFVSDNHCSLIFDEIGVSIKDNAT 215
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A2I0VFW7_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VFW7_9ASPA) HSP 1 Score: 61.6 bits (148), Expect = 3.840e-8 Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 0
Query: 2 CHRCDQIGHVHTQCTARVTLSTDP-NPPQCGLPVALTNQNPTINNGNIWVSDSGASNHMTNDLSKIYDLRKPVA--GEDVVMLGDGSTLVVDLVGKLHLIIHSTTDVPATLEVSYLPELNFNLFSLHKIQGKYPISL 135
C C+++GH+ C R P NP +A NQ P+ + W+ DSGASNH+T DLS +L+ PV G+D V + +GS L V G+ L + T ++ ++P L+ NL S+ K+ P+S+
Sbjct: 18 CQICNKVGHIALNCWHRSNPRFAPTNPRSINALLAQPNQIPSQD----WIIDSGASNHLTPDLS---NLQYPVQYHGQDSVSIANGSQLPVAHSGQCLLPLPETPRKLYLRKLLHVPHLSHNLLSVSKLTTDNPVSV 147
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A1J3J5Y3_NOCCA (gag_pre-integrs domain-containing protein n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3J5Y3_NOCCA) HSP 1 Score: 61.2 bits (147), Expect = 4.570e-8 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 0
Query: 4 RCDQIGHVHTQCTARVTLSTDPNPPQCGLPVALTNQNPTINNGNIWVSDSGASNHMTNDLSKIYDLRKPVAGEDVVMLGDGSTLVVDLVGKLHL-IIHSTTDVPATLEVSYLPELNFNLFSLHKIQGKYPISLDAAGTHINNK 145
RC Q+ H Q R L T P PP LP A P+ WV DSGA++H+T+DLS + L +P G + V++G+G+ L + G L IH + + L V P + NL S++++ +S++ + TH K
Sbjct: 252 RCSQL-HTVQQSPQRALLPTPPYPPSPWLPRANLATTPS------WVVDSGATHHITSDLSNL-SLHQPYTGGEEVIVGNGNGLPITRTGFTSLPSIHKSLSLHNVLCV---PSIQKNLISVYRLCNVNQVSVEFSPTHFQVK 383
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A1J3D5H7_NOCCA (Uncharacterized protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D5H7_NOCCA) HSP 1 Score: 59.7 bits (143), Expect = 5.000e-8 Identity = 46/148 (31.08%), Postives = 72/148 (48.65%), Query Frame = 0
Query: 4 RCDQIGHVHTQCTARVTLSTDPNPPQCGLPVALTNQNPTINNGNIWVSDSGASNHMTNDLSKIYDLRKPVAGEDVVMLGDGSTLVVDLVGKLHLIIHSTTDVPATLE------VSYLPELNFNLFSLHKIQGKYPISLDAAGTHINNK 145
RC Q+ H Q R L T P PP LP A P+ WV DSGA++H+T+DLS + L +P G + V++G+G+ L + G T +P+TL+ V +P + NL S++++ +S++ H K
Sbjct: 4 RCSQL-HTVQQSPQRALLPTPPYPPSPWLPRANLATTPS------WVVDSGATHHITSDLSNL-SLHQPYTGGEEVIVGNGNGLPITHTGF--------TSLPSTLKSLSLHNVLCVPSIQKNLISVYRLCNANQVSVEFFPAHFQVK 135
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A2I0VGA3_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VGA3_9ASPA) HSP 1 Score: 61.2 bits (147), Expect = 5.220e-8 Identity = 48/141 (34.04%), Postives = 69/141 (48.94%), Query Frame = 0
Query: 2 CHRCDQIGHVHTQCTARVTLSTDPNPPQCGLPVALTNQNPTI-NNGNIWVSDSGASNHMTNDLSKIYDLRKPVAGEDVVMLGDGSTLVVDLVGKLHLIIHSTTDVPATLEVSYLPELNFNLFSLHKIQGKYPISL--DAAG 139
C C +IGH+ C R P P AL Q TI NN N W+ D+GAS H+T D+S + AG+D V + +GST+ + G+ L + T ++ ++P L NL S+ K+ PIS+ DA G
Sbjct: 283 CQICGKIGHIAINCWHRCNFKYAPT--NTRSPQALQAQ--TIPNNSNEWILDTGASAHLTPDISNVQ-YPHSYAGQDSVSIANGSTVPIQNSGQGILPLPDTPRKLYLRKILHVPSLAQNLLSVSKLTADNPISIKFDANG 418
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A2N9F8M1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F8M1_FAGSY) HSP 1 Score: 60.8 bits (146), Expect = 7.270e-8 Identity = 40/128 (31.25%), Postives = 64/128 (50.00%), Query Frame = 0
Query: 2 CHRCDQIGHVHTQCTARVTLSTD-PNPPQCGLPVA-LTNQNPTINNGNIWVSDSGASNHMTNDLSKIYDLRKPVAGEDVVMLGDGSTLVVDLVGKLHLIIHSTTDVPATLEVSYLPELNFNLFSLHKI 127
C C ++GH C R+ + NPP +A +N N T G W++DSGAS+H+T DL+ + P G + V +G+G L + +G L H+ + V ++P + NL S+HK+
Sbjct: 318 CQICGKLGHYAIDCYHRMDFAYQGKNPPTKLAAMANASNLNMTQGTGETWLTDSGASDHITADLNNLNQ-PTPFKGPEQVSVGNGQNLPIQNIGNTQL--HTKLSLFKLRNVLHVPRIASNLLSVHKL 442
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A2N9HVC4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HVC4_FAGSY) HSP 1 Score: 60.5 bits (145), Expect = 9.880e-8 Identity = 40/128 (31.25%), Postives = 64/128 (50.00%), Query Frame = 0
Query: 2 CHRCDQIGHVHTQCTARVTLSTD-PNPPQCGLPVA-LTNQNPTINNGNIWVSDSGASNHMTNDLSKIYDLRKPVAGEDVVMLGDGSTLVVDLVGKLHLIIHSTTDVPATLEVSYLPELNFNLFSLHKI 127
C C ++GH C R+ + NPP +A +N N T G W++DSGAS+H+T DL+ + P G + V +G+G L + +G L H+ + V ++P + NL S+HK+
Sbjct: 318 CQICGKLGHYAIYCYHRMDFAYQGKNPPTKLAAMANASNLNMTQGTGETWLTDSGASDHITADLNNLNQ-PTPFKGPEQVSVGNGQNLPIQNIGNTQL--HTKLSLFKLRNVLHVPRIASNLLSVHKL 442
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Match: A0A5N6NBX7_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NBX7_9ASTR) HSP 1 Score: 60.5 bits (145), Expect = 9.940e-8 Identity = 44/147 (29.93%), Postives = 72/147 (48.98%), Query Frame = 0
Query: 1 RCHRCDQIGHVHTQCTARVTLSTDPNPPQC----GLPVALTNQNPTINNGNIWVSDSGASNHMTNDLSKIYDLRKPVAGEDVVMLGDGSTLVVDLVGKLHLIIHSTTDVPATLE-VSYLPELNFNLFSLHKIQGKYPISLDAAGTHI 142
+C C GH T CTA PP P A + N+ W+ D+GASNH+TNDLS + L P G D +++G+GS+L + +G ++I ++VP L+ V +P ++ N+ S+ ++ P+ + H
Sbjct: 584 KCQWCFTKGHSLTTCTAFKKAHPHITPPSFPKLNSKPQAHMAATTSANSTPAWLFDTGASNHVTNDLS-VLSLHNPYDGTDDLIIGNGSSLPITHIGSTTILI---SNVPVHLQHVLCVPLISRNIISISRLCIDNPLLISFFSCHF 726 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45354.11395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig45354.11395.1 ID=prot_H-paniculata_contig45354.11395.1|Name=mRNA_H-paniculata_contig45354.11395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bpback to top |