prot_H-paniculata_contig45072.11339.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45072.11339.1
Unique Nameprot_H-paniculata_contig45072.11339.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
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BLAST of mRNA_H-paniculata_contig45072.11339.1 vs. uniprot
Match: A0A151ITN2_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151ITN2_9HYME)

HSP 1 Score: 55.1 bits (131), Expect = 6.710e-7
Identity = 27/79 (34.18%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:    2 EIWICDNGATKHMTHNSDFRFSYQEC-DGHVRLADGNRLSIEGVGMLFLQFRFDSEVVLMKLTQVVFIPLLSHHVLSFG 79
            ++WI D+GA++HMTH S++  + Q   D HV L DG +  + G G +++Q   D + +   L  V+++P L+ ++ S G
Sbjct:  286 DVWILDSGASRHMTHRSNWISNLQTYKDEHVSLGDGTKCKVHGRGTVYIQRLVDGQWLDGVLEDVLYVPDLNKNLFSVG 364
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45072.11339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A151ITN2_9HYME6.710e-734.18Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45072contigH-paniculata_contig45072:1043..1291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45072.11339.1mRNA_H-paniculata_contig45072.11339.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45072 1043..1291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45072.11339.1 ID=prot_H-paniculata_contig45072.11339.1|Name=mRNA_H-paniculata_contig45072.11339.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
MEIWICDNGATKHMTHNSDFRFSYQECDGHVRLADGNRLSIEGVGMLFLQ
FRFDSEVVLMKLTQVVFIPLLSHHVLSFGKFAD
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