prot_H-paniculata_contig4505.11335.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4505.11335.1
Unique Nameprot_H-paniculata_contig4505.11335.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length738
Homology
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BLAST of mRNA_H-paniculata_contig4505.11335.1 vs. uniprot
Match: D7G8U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U5_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 1.930e-51
Identity = 163/356 (45.79%), Postives = 202/356 (56.74%), Query Frame = 0 
Query:  387 QSPRDEAEKAEIEKANGISEYELQRLERIRKNQAFMASLGLCTTKLSPSVVGTTSAAVGGXXXXXXXXXXXXXRSRPVSRDKDRAPSL-PVRRSARARGTEAVNYSEDKPAVVSSV--------PQREPEPEVQEIDFDDSTVLKYLCRGKSDELPTMAEPEGASSAPDSNSQKTNMDGETPASQGHAKDGGRRTGGGGGSANQNLVGMRLLDPGRPLSASGLPTIYTMRFCGEDGSGXXXXXXXXXXXXXXXGGVIALFSTQAHPTNRAIAGENSPGSDDDDDVDD--ERTLMNFKAHKGWVSAVRFLAGGGGSXXXXXXXXXXXDAGGCCLLSSANDSVVRLWDISKQHKGVPR 731
            +SP +  E+A   +A GIS+YEL+RLERI++NQAFMA+LGL T K   +   T+S    G             RSRPVSR +++A ++ PVRRSAR RG EAV+Y+EDK A+ +             EPEP ++EIDFDDSTVLKYLC G    +      + ++ AP++ +       +T A+          TG G  SA   +VG+R++DP  PLSASGL TIYTM FCG   + XXXXXXXXXXXXXXX                                    ERTLMNFKAHKGWVSAVRFL GGG               GGC LL+SANDSVV+LWD SKQH+G PR
Sbjct:  302 KSPGNTKEEAGAARAGGISQYELERLERIKRNQAFMATLGLATAKPLAAPAATSSEGTKGRNKNKK-------RSRPVSRSREKAATVVPVRRSARGRGAEAVDYNEDKQAINAVARAXXXXXXXXXEPEPILEEIDFDDSTVLKYLC-GTEANVKDGGGNDSSAEAPNT-AXXXXXXXQTAATL---------TGTGAASAGATVVGLRVIDPDDPLSASGLSTIYTMHFCGARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERTLMNFKAHKGWVSAVRFLEGGGAGAG----------VGGCRLLTSANDSVVKLWDTSKQHRGTPR 629
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BLAST of mRNA_H-paniculata_contig4505.11335.1 vs. uniprot
Match: A0A6H5KMN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN1_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.090e-49
Identity = 157/343 (45.77%), Postives = 188/343 (54.81%), Query Frame = 0 
Query:  400 KANGISEYELQRLERIRKNQAFMASLGLCTTKLSPSVVGTTSAAVGGXXXXXXXXXXXXXRSRPVSRDKDRAPSL-PVRRSARARGTEAVNYSEDKPAVVSSVPQR--------EPEPEVQEIDFDDSTVLKYLCRGKSDELPTMAEPEGASSAPDSNSQKTNMDGETPASQGHAKDGGRRTGGGGGSANQNLVGMRLLDPGRPLSASGLPTIYTMRFCGEDGSGXXXXXXXXXXXXXXXGGVIALFSTQAHPT--NRAIAGENSPGSDDDDDVDDERTLMNFKAHKGWVSAVRFLAGGGGSXXXXXXXXXXXDAGGCCLLSSANDSVVRLWDISKQHKGVPR 731
            +A  IS+YEL+RLERI++NQAFMA+LGL T K   +   T S    G             RSRPVSR +++A ++ PVRRSARARG EAV+Y+EDK A+ +             EPEP ++EIDFDDSTV KYLC  ++++         A +                   G A            SA   +VG+R++DP  PLSASGL TIYTM FCG   + XXXXXXXXXXXXXXX                 R      S G+       DERTLMNFKAHKGWVSAVRFL GGG               GGC LL+SANDSVV LWD SKQH+G PR
Sbjct:  193 RAGVISQYELERLERIKRNQAFMATLGLATAKPLAASAATWSEGTKGRSQNKN-------RSRPVSRSREKASTVVPVRRSARARGAEAVDYNEDKQAINAIATAAXXXXXXXXEPEPILEEIDFDDSTVFKYLCGTEANDKDGGGNDSSAEAPNXXXXXXXXXXXXXXXXTGAA------------SAGATVVGLRVIDPDYPLSASGLSTIYTMHFCGAKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQTDHLESHGNGKXXXXXDERTLMNFKAHKGWVSAVRFLEGGGAGAG----------VGGCRLLTSANDSVVNLWDTSKQHRGSPR 506
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BLAST of mRNA_H-paniculata_contig4505.11335.1 vs. uniprot
Match: A0A835ZGB7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGB7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.390e-17
Identity = 101/340 (29.71%), Postives = 142/340 (41.76%), Query Frame = 0 
Query:  404 ISEYELQRLERIRKNQAFMASLGLCTTKLSPSVVGTTSAAVGGXXXXXXXXXXXXXRSRPVSRDKDRAPSLPVRRSARARGTEA-VNYSEDKPAVV-----SSVPQREPEPEVQEIDFDDSTVLKYLCRGKSDELPTMAEPEGASSAPDSNSQKTNMDGETPASQGHAKDGGRRTGGGGGSANQNLVGMRLLDPGRPLSASGLPTIYTMRFCG--EDGSGXXXXXXXXXXXXXXXGGVIALFSTQAHPTNRAIAGENSPGSDDDDDVDDERTLMNFKAHKGWVSAVRFLAGGGGSXXXXXXXXXXXDAGG-----CCLLSSANDSVVRLWDISKQHKGVP 730
            +S +ELQRL  I +N+AF+A+LG+   K  P      + A                R            S P RRS R +G    V Y E+   VV     +++ Q +   +++EI++DDS V KY     +DE        G +S  D ++   N                           + + G++L  P R L ASGL  IY+M F G  +  +                GG++ALF        R     +  G  D  D     +LM F+AHKGWVSAV+F   GG +           +AGG       LLSS ND VV+LWD+S+Q KG P
Sbjct:   88 LSPFELQRLANIERNKAFLATLGIDKCKPQPLKPKAPTGA-------------GKRRKGARGVGAGAGGSAPTRRSTRLQGGGGKVVYDENALHVVEEGECAAIQQVQ---QLKEIEYDDSDVFKYSLDSSTDEA-------GVASGADGDAYIGN--------------------------GREVKGVQLAHPHRTLQASGLTAIYSMHFSGGTDSNAPCGSTPQLGLLAAGGKGGIVALF--------RVAPAVSLAGDADQQDA----SLMTFRAHKGWVSAVQFAERGGATVEVGGGRDV--EAGGRGGRALLLLSSGNDGVVKLWDVSRQSKGTP 364
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4505.11335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8U5_ECTSI1.930e-5145.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMN1_9PHAE2.090e-4945.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGB7_9STRA2.390e-1729.71WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 664..721
e-value: 6.5E-5
score: 32.3
coord: 588..638
e-value: 140.0
score: 3.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 596..736
e-value: 1.4E-7
score: 33.1
NoneNo IPR availablePANTHERPTHR14773UNCHARACTERIZEDcoord: 401..725
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 708..722
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 624..732

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4505contigH-paniculata_contig4505:708..11743 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4505.11335.1mRNA_H-paniculata_contig4505.11335.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4505 708..11781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4505.11335.1 ID=prot_H-paniculata_contig4505.11335.1|Name=mRNA_H-paniculata_contig4505.11335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=738bp
MSPSKGNKRKTPSAENSSSLVQPSILSFFGSKTLAPSGVGSPPVASSKGK
IRSRTASKIDHVGGSVPGRGDLPPTVSKRQNQLTVVGCLAVKATPPSPAC
MVVTRDLFDPHADTIGAVKRAKSGKCPNSSPQLLHAKDRSEDEPSCAGSE
IPLNSKRFTAVKDSHINSSGSGATVRTPTVTSPLPAKNLYAEPAAQAERG
GGTVTVAKKRRGDRGSDLVWQDSDAVKRGRDRGKSAVGRGRVNVRAKADR
LGTNKRELPIRRRRQGRNNEGETAVGGREDGMEEDALESTAGGASSDSDG
GGGRSSSSDGENEACGEESYSKEYSRSSEQRSQSSQDVQEELGQDDGQMQ
NRSGKGNKPNGIPSSWDKDCDGSTGGGETLLGMTREQSPRDEAEKAEIEK
ANGISEYELQRLERIRKNQAFMASLGLCTTKLSPSVVGTTSAAVGGSAGA
TPAAAKKKKRSRPVSRDKDRAPSLPVRRSARARGTEAVNYSEDKPAVVSS
VPQREPEPEVQEIDFDDSTVLKYLCRGKSDELPTMAEPEGASSAPDSNSQ
KTNMDGETPASQGHAKDGGRRTGGGGGSANQNLVGMRLLDPGRPLSASGL
PTIYTMRFCGEDGSGGGGGGPPALLAAGGKGGVIALFSTQAHPTNRAIAG
ENSPGSDDDDDVDDERTLMNFKAHKGWVSAVRFLAGGGGSSGGVGGFGGR
GDAGGCCLLSSANDSVVRLWDISKQHKGVPRCDVRTF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf