prot_H-paniculata_contig45048.11334.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45048.11334.1
Unique Nameprot_H-paniculata_contig45048.11334.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: D7FV66_ECTSI (Postmeiotic segregation increased 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV66_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 1.930e-45
Identity = 86/100 (86.00%), Postives = 91/100 (91.00%), Query Frame = 0
Query:   15 DAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDRNGKLVRK 114
            DAGAKHVEVKLKEFG+DLIEVSDNGSGVSPSNYE LALKYHTSKL+ FSDL  V SFGFRGEALSSLCELAGSFSVTTRT+ ESVGVKL Y RNGK++ K
Sbjct:   39 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGK 138          
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: A0A835YM26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM26_9STRA)

HSP 1 Score: 156 bits (394), Expect = 5.140e-42
Identity = 80/100 (80.00%), Postives = 89/100 (89.00%), Query Frame = 0
Query:   15 DAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDRNGKLVRK 114
            DAGA HVEVKL+EFGLDLIEVSDNGSGV P NYE LALKYHTSKL+ F+DL ++ SFGFRGEALSSLCELAGSF VTTRT+ ++VGVKLTY+R GKLV K
Sbjct:   37 DAGATHVEVKLREFGLDLIEVSDNGSGVPPHNYEGLALKYHTSKLTEFNDLKSIASFGFRGEALSSLCELAGSFVVTTRTADQAVGVKLTYNRAGKLVSK 136          
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: W7T722_9STRA (Dna mismatch repair protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T722_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.520e-37
Identity = 65/98 (66.33%), Postives = 84/98 (85.71%), Query Frame = 0
Query:   15 DAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDRNGKLV 112
            DAGA  VEVKLK +G++ IEVSDNGSGV+P N+++L LKYHTSKLS F+DL +V SFGFRGEALSSLCE+AG+F V+TR  +E++G K+ YDR+GK++
Sbjct:  122 DAGATQVEVKLKNWGVESIEVSDNGSGVAPQNFQALTLKYHTSKLSTFADLESVASFGFRGEALSSLCEIAGAFEVSTRGENEAIGAKIVYDRSGKIL 219          
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: K8Z7Z8_NANGC (DNA mismatch repair protein PMS2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z7Z8_NANGC)

HSP 1 Score: 128 bits (321), Expect = 4.710e-35
Identity = 61/92 (66.30%), Postives = 79/92 (85.87%), Query Frame = 0
Query:   21 VEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDRNGKLV 112
            VEVKLK +G++ IEVSDNGSGV+P N+++L LKYHTSKLS F+DL +V SFGFRGEALSSLCE+AG+F V+TR  +E +G K+ YDR+GK++
Sbjct:   39 VEVKLKNWGVESIEVSDNGSGVAPQNFQALTLKYHTSKLSTFADLESVASFGFRGEALSSLCEIAGAFEVSTRGENEDIGAKIVYDRSGKIL 130          
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: A0A2P4XQ12_9STRA (Mismatch repair endonuclease pms1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQ12_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.290e-33
Identity = 65/99 (65.66%), Postives = 78/99 (78.79%), Query Frame = 0
Query:   15 DAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDRNGKLVR 113
            DAGA  +EVKLKEFG D  EVSDNG GV+P NY  LA K++TSK+S+F D+  V SFGFRGEALSS+CELA SF+V TRT  E+VGV L YD +GK+V+
Sbjct:   38 DAGATQIEVKLKEFGRDAFEVSDNGVGVAPENYAFLARKHYTSKISSFEDIETVASFGFRGEALSSICELAKSFTVCTRTKDETVGVLLEYDASGKVVK 136          
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: A0A4D9CZ00_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ00_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.030e-32
Identity = 63/93 (67.74%), Postives = 79/93 (84.95%), Query Frame = 0
Query:   15 DAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDR 107
            DAGA  VEVKLK +G++ IEVSDNGSGV+P N+++L LKYHTSKLS F+DL +V SFGFRGEALSSLCE+AG+F V+TR  +E++G K+ YDR
Sbjct:   93 DAGATQVEVKLKNWGVESIEVSDNGSGVAPQNFQALTLKYHTSKLSTFADLESVASFGFRGEALSSLCEIAGAFEVSTRGENEAIGAKIVYDR 185          
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: M4C6J1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6J1_HYAAE)

HSP 1 Score: 120 bits (301), Expect = 1.930e-32
Identity = 61/98 (62.24%), Postives = 76/98 (77.55%), Query Frame = 0
Query:   15 DAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDRNGKLV 112
            DAGA  +EVKL+EFG D  EVSDNG+GV+P NY +LA K+ TSK+  F DL  V SFGFRGEALS++CELA +F+V TRT++E+VG  L YD +G LV
Sbjct:   46 DAGASQIEVKLQEFGRDAFEVSDNGAGVAPENYAALARKHFTSKIRQFEDLARVASFGFRGEALSAICELAATFTVCTRTANETVGALLKYDVSGALV 143          
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: A0A0W8DAC7_PHYNI (DNA_mis_repair domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DAC7_PHYNI)

HSP 1 Score: 126 bits (317), Expect = 4.970e-32
Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 0
Query:   15 DAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDRNGKLVR 113
            DAGA  +EVKLKEFG D  EV DNG+GV+P NY SLA K++TSK+S+F D+  V SFGFRGEALSS+CELA SF+V TRT +++VG+ L YD +G LV+
Sbjct:   40 DAGATQIEVKLKEFGRDAFEVGDNGAGVTPENYASLARKHYTSKISSFEDIETVASFGFRGEALSSICELAASFTVCTRTKNDAVGMLLEYDASGTLVK 138          
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: A0A833X1G2_PHYIN (MutL C terminal dimerization domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X1G2_PHYIN)

HSP 1 Score: 127 bits (320), Expect = 6.400e-32
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 0
Query:   15 DAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDRNGKLVR 113
            DAGA  +EVKLKEFG D  EVSDNG+GV+P NY SLA K++TSK+S+F D+  V SFGFRGEALSS+CELA SF+V TRT +++VG  L YD +G LV+
Sbjct:   40 DAGATQIEVKLKEFGRDAFEVSDNGAGVAPENYASLARKHYTSKISSFEDIETVASFGFRGEALSSICELAASFTVCTRTQNDAVGTLLMYDASGALVK 138          
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Match: A0A2P4YBT7_9STRA (Mismatch repair endonuclease pms1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YBT7_9STRA)

HSP 1 Score: 127 bits (318), Expect = 9.010e-32
Identity = 65/99 (65.66%), Postives = 78/99 (78.79%), Query Frame = 0
Query:   15 DAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESLALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVGVKLTYDRNGKLVR 113
            DAGA  +EVKLKEFG D  EVSDNG GV+P NY  LA K++TSK+S+F D+  V SFGFRGEALSS+CELA SF+V TRT  E+VGV L YD +GK+V+
Sbjct:   38 DAGATQIEVKLKEFGRDAFEVSDNGVGVAPENYAFLARKHYTSKISSFEDIETVASFGFRGEALSSICELAKSFTVCTRTKDETVGVLLEYDASGKVVK 136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45048.11334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV66_ECTSI1.930e-4586.00Postmeiotic segregation increased 2 n=2 Tax=Ectoca... [more]
A0A835YM26_9STRA5.140e-4280.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7T722_9STRA4.520e-3766.33Dna mismatch repair protein n=1 Tax=Nannochloropsi... [more]
K8Z7Z8_NANGC4.710e-3566.30DNA mismatch repair protein PMS2 n=1 Tax=Nannochlo... [more]
A0A2P4XQ12_9STRA1.290e-3365.66Mismatch repair endonuclease pms1 (Fragment) n=1 T... [more]
A0A4D9CZ00_9STRA1.030e-3267.74Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
M4C6J1_HYAAE1.930e-3262.24Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0W8DAC7_PHYNI4.970e-3263.64DNA_mis_repair domain-containing protein n=1 Tax=P... [more]
A0A833X1G2_PHYIN6.400e-3264.65MutL C terminal dimerization domain n=1 Tax=Phytop... [more]
A0A2P4YBT7_9STRA9.010e-3265.66Mismatch repair endonuclease pms1 n=1 Tax=Phytopht... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 14..114
e-value: 3.2E-32
score: 113.7
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 15..110
NoneNo IPR availablePFAMPF13589HATPase_c_3coord: 15..106
e-value: 8.4E-7
score: 28.9
NoneNo IPR availablePANTHERPTHR10073:SF52MISMATCH REPAIR ENDONUCLEASE PMS2-RELATEDcoord: 15..113
IPR038973DNA mismatch repair protein MutL/Mlh/PmsPANTHERPTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLcoord: 15..113
IPR014762DNA mismatch repair, conserved sitePROSITEPS00058DNA_MISMATCH_REPAIR_1coord: 72..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45048contigH-paniculata_contig45048:1004..1345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45048.11334.1mRNA_H-paniculata_contig45048.11334.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45048 1004..1345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45048.11334.1 ID=prot_H-paniculata_contig45048.11334.1|Name=mRNA_H-paniculata_contig45048.11334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
IHRPATRTKRAHMQDAGAKHVEVKLKEFGLDLIEVSDNGSGVSPSNYESL
ALKYHTSKLSAFSDLMAVTSFGFRGEALSSLCELAGSFSVTTRTSSESVG
VKLTYDRNGKLVRK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036890HATPase_C_sf
IPR038973MutL/Mlh/Pms
IPR014762DNA_mismatch_repair_CS