prot_H-paniculata_contig45.11324.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45.11324.1
Unique Nameprot_H-paniculata_contig45.11324.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length558
Homology
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BLAST of mRNA_H-paniculata_contig45.11324.1 vs. uniprot
Match: D8LQ68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ68_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 2.040e-15
Identity = 65/135 (48.15%), Postives = 77/135 (57.04%), Query Frame = 0 
Query:  422 ATIKTLQSELSLLKELVLSSEQKREEELSELRIRLEAQERRNRLPASDGDPQQMLSENGQRK----MGAGALNPSCRAQDDNADSGGV--SPRSTGVHNPFAAQEGGVATTPRDHFPAFEDALHDGASDDCAPSG 550
            ATI+ L++ELS L+E VL SEQKRE +L EL  RL  QERR+    S       L E G+R+    +G  AL     A +   D GG   +PR   V NPFA   GG ATTPRDHFPAFEDAL D    +  P G
Sbjct:  366 ATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSATSTALREEGEREAVAAIGTAALVVG-EAVETGRDKGGCRDTPRGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEATPGG 499
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BLAST of mRNA_H-paniculata_contig45.11324.1 vs. uniprot
Match: A0A6H5L0S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S8_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.430e-14
Identity = 65/135 (48.15%), Postives = 76/135 (56.30%), Query Frame = 0 
Query:  422 ATIKTLQSELSLLKELVLSSEQKREEELSELRIRLEAQERRNRLPASDGDPQQMLSENGQRK----MGAGALNPSCRAQDDNADSGGVSPRSTG--VHNPFAAQEGGVATTPRDHFPAFEDALHDGASDDCAPSG 550
            ATI+ L++ELS L+E VL SEQKRE +L EL  RL  QERR+    S       L E G+R+    +G  AL     A +   D GG     TG  V NPFA   GG ATTPRDHFPAFEDAL D    +  P G
Sbjct:  341 ATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSTTSTTLREEGEREGVTAIGTAALVVG-EAVETARDKGGCRDTPTGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESEGTPGG 474
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45.11324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ68_ECTSI2.040e-1548.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0S8_9PHAE1.430e-1448.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 417..462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45contigH-paniculata_contig45:45392..50931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45.11324.1mRNA_H-paniculata_contig45.11324.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45 45392..51019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45.11324.1 ID=prot_H-paniculata_contig45.11324.1|Name=mRNA_H-paniculata_contig45.11324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=558bp
MEAGRPADVSVRDLVEEFQTLDVDEMGDANTNAGFSDTTLEQSIGGDDIS
GIPAVDGDDEEEDDRETDDEAAADILDQVKLGAVASAIKGASLMATPSPP
KSLLCPSCFTEHDRLSKFCKFCGELVCQEPTEKSQDRAGDASVSSAPVTE
PGARQGMIADGDGDGVSDERESESEAWDSVDSEPSTGAIAPVADFHPVEG
RSHGVGSSRKSGSGDSSNPNMSSPTRPDEASSDWDCVEGESSDTISHNEN
GQRFARENIHSRDTASTDGMRSPEPHCAASLSAPRVDSTAMEKKPAVTSA
GEAAASNVRDLRPQANSRPAECLPDGRQEVQRSDTDKHSTLSPILGSRRP
VERLSSAIAMRGERRGLEPIEAVIIEGVVCSKEQDNGSSVHVVTEQGSSG
AAAVEEAVEESAAKEAAETAAATIKTLQSELSLLKELVLSSEQKREEELS
ELRIRLEAQERRNRLPASDGDPQQMLSENGQRKMGAGALNPSCRAQDDNA
DSGGVSPRSTGVHNPFAAQEGGVATTPRDHFPAFEDALHDGASDDCAPSG
NREGNNGD
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