prot_H-paniculata_contig4494.11311.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4494.11311.1
Unique Nameprot_H-paniculata_contig4494.11311.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length95
Homology
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: D8LTR3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR3_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 9.980e-38
Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 0
Query:    1 MPLKGNVIGGGLRMAKNLSNAGRKRIPMTSKMGNKNFYKGKGGTKEGHLNSKANFVVDPEMRLEIVAPDLTGFKLKPYVSKAV-RYGKGGQ 90
            MPL GN++ GGLRM+K +S + RKRIPMTSKMGNKNFYKGKG TKEG +NS+  F+VDPE RLEI+APDL GFKLKPYVSKAV +  +GGQ
Sbjct:    1 MPLIGNIVTGGLRMSKYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWKPRRGGQ 91          
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: A0A835ZJH5_9STRA (Mitochondrial ribosomal protein L27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJH5_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.890e-24
Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 MPLKGNVIGGGLRMAKNLSNAGRKRIPMTSKMGNKNFYKGKGGTKEGHLNSKANFVVDPEMRLEIVAPDLTGFKLKPYVSKAV 83
            MP+ G++  G LRM+K LS A  KR P+  K GNKNFYKG G   EG LNSKA F++D +  LE+VAPDLT F+LKPYV+K++
Sbjct:    1 MPVLGDIARGALRMSKYLSKAATKRAPLHRKHGNKNFYKGTGARSEGKLNSKAKFILDKDKLLELVAPDLTNFQLKPYVAKSI 83          
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: A0A7S0AF32_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AF32_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.980e-21
Identity = 49/87 (56.32%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    2 PLKGNVIGGGLRMAKNLSNAGRKRIPMTSKMGNKNFYKGKGGTKEGHLNSKANFVVDPEMRLEIVAPDLTGFKLKPYVSKAV-RYGK 87
            P  G+V G    M+K LS + RKR+P+T+K   K FYKG G TKEG+      FVVD  +RLE+VAPDLTGFKLKPYV++ V RY K
Sbjct:   66 PATGSVGGAVRCMSKFLSKSARKRLPLTTKRAKKGFYKGNGATKEGYFGKGGKFVVDKSLRLELVAPDLTGFKLKPYVAQQVPRYPK 152          
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: A0A1Z5J9Q3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9Q3_FISSO)

HSP 1 Score: 89.4 bits (220), Expect = 4.140e-21
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0
Query:   14 MAKNLSNAGRKRIPMTSKMGNKNFYKGKGGTKEGHLNSKANFVVDPEMRLEIVAPDLTGFKLKPYVSKAV 83
            M+K LS A +KR+ +T+K  +K FYKG G TKEG L SK  F+VDP  RLE+V PDLTGFKLKPY++++V
Sbjct:   29 MSKYLSKAAKKRLVLTTKRAHKGFYKGNGATKEGRLTSKGKFIVDPLRRLELVVPDLTGFKLKPYIARSV 98          
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: A0A7S1D0Q8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0Q8_CYCTE)

HSP 1 Score: 87.4 bits (215), Expect = 1.910e-20
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
Query:   14 MAKNLSNAGRKRIPMTSKMGNKNFYKGKGGTKEGHLNSKANFVVDPEMRLEIVAPDLTGFKLKPYVSKAV 83
            M+K LS +  KR+P+ +K   K FYKGKGGTK+G L SK  F+VDP  RLE+V PDL GFKLKPY++  V
Sbjct:   21 MSKFLSKSATKRLPLGTKRARKGFYKGKGGTKDGRLTSKGKFIVDPAKRLELVVPDLQGFKLKPYIASTV 90          
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: A0A7S3L6Q4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6Q4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.270e-20
Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 0
Query:   14 MAKNLSNAGRKRIPMTSKMGNKN-FYKGKGGTKEGHLNSKANFVVDPEMRLEIVAPDLTGFKLKPYVSKAV 83
            M+K +S + RKR P+T+K  ++  FYKGKGGTKEG L SK  F+VDP  RLE++ PDLTGFKLKPY++ +V
Sbjct:   27 MSKYMSKSARKRQPLTTKRASRGGFYKGKGGTKEGRLTSKGKFIVDPLKRLELIVPDLTGFKLKPYIAASV 97          
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: A0A7S4A9E0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9E0_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 8.070e-18
Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   14 MAKNLSNAGRKRIPMTSKMGNKNFYKGKGGTKEGHLNSKANFVVDPEMRLEIVAPDLTGFKLKPYVSK 81
            ++K +S + RKR+P+T+K   K +YKG G TKEG L SK  FV DP+ +LE++APDL GF LKPY+++
Sbjct:   52 ISKYISKSARKRLPLTTKRAGKGYYKGNGSTKEGRLTSKGKFVSDPKKKLELMAPDLEGFNLKPYIAR 119          
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: A0A7S2XKT9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKT9_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.340e-17
Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 0
Query:   10 GGLR-MAKNLSNAGRKRIPMTSKMGNKNFYKGKGGTKEGHLNSKANFVVDPEMRLEIVAP-DLTGFKLKPYVS 80
            GG+R M+K LS +  KR+P++SK   K +YKG GGTKEGH+ SK  FVVD   RLEIV P  L GF+LKPYVS
Sbjct:   27 GGVRFMSKYLSKSATKRVPLSSKRARKGYYKGNGGTKEGHITSKGRFVVDFSKRLEIVMPRTLEGFQLKPYVS 99          
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: A0A7S2KAW4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KAW4_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.320e-16
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   14 MAKNLSNAGRKRIPMTSKMGNKNFYKGKGGTKEGHLNSKANFVVDPEMRLEIVAPDLTGFKLKPYVSKAV 83
            M+K L+ A  KR+P+T+K   K +YKG G T EG + SK  F+ DP  +L++V PDL GFKLKPY++ AV
Sbjct:   65 MSKYLTKAATKRLPLTNKKVKKGYYKGNGATVEGRITSKGKFIADPMKKLQLVVPDLEGFKLKPYIASAV 134          
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Match: A0A1E7FEX8_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEX8_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.050e-16
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   26 IPMTSKMGNKNFYKGKGGTKEGHLNSKANFVVDPEMRLEIVAPDLTGFKLKPYVSK 81
            +P+T+K   K FYKGKGGTKEG LNSKA F+ DP  ++E++ PDL GF LK Y+++
Sbjct:    1 MPLTTKRAGKGFYKGKGGTKEGRLNSKAKFITDPRKQVELIVPDLEGFTLKAYIAR 56          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4494.11311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR3_ECTSI9.980e-3872.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJH5_9STRA1.890e-2457.83Mitochondrial ribosomal protein L27-domain-contain... [more]
A0A7S0AF32_9STRA2.980e-2156.32Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A1Z5J9Q3_FISSO4.140e-2160.00Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1D0Q8_CYCTE1.910e-2058.57Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3L6Q4_9STRA3.270e-2059.15Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S4A9E0_9STRA8.070e-1852.94Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2XKT9_9STRA1.340e-1760.27Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2KAW4_9STRA1.320e-1651.43Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1E7FEX8_9STRA2.050e-1657.14Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019189Ribosomal protein L27/L41, mitochondrialPFAMPF09809MRP-L27coord: 21..84
e-value: 4.3E-17
score: 62.0
IPR019189Ribosomal protein L27/L41, mitochondrialPANTHERPTHR21338MITOCHONDRIAL RIBOSOMAL PROTEIN L41coord: 13..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4494contigH-paniculata_contig4494:3472..6081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4494.11311.1mRNA_H-paniculata_contig4494.11311.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4494 2046..7097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4494.11311.1 ID=prot_H-paniculata_contig4494.11311.1|Name=mRNA_H-paniculata_contig4494.11311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
MPLKGNVIGGGLRMAKNLSNAGRKRIPMTSKMGNKNFYKGKGGTKEGHLN
SKANFVVDPEMRLEIVAPDLTGFKLKPYVSKAVRYGKGGQGEPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019189Ribosomal_L27/L41_mit