prot_H-paniculata_contig44709.11273.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44709.11273.1
Unique Nameprot_H-paniculata_contig44709.11273.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: A0A8F0F7F4_9PHAE (Ribosomal protein L9 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7F4_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 9.600e-80
Identity = 126/155 (81.29%), Postives = 139/155 (89.68%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            MRKKT+Q ILT+NVHLLGKQGQ+IKVK GYIRNYLIPSKLGKLATP LINQ+ + QQ+L  KEKQ  EKYTKFKEI+ENLEKF IKKKISENGKFFGKITKKQILDLI+NK GGT ELTK+QLELP+MK+VGDY+I I+L TNII  INIKILPE
Sbjct:    1 MRKKTVQVILTQNVHLLGKQGQLIKVKSGYIRNYLIPSKLGKLATPKLINQFKLRQQELTIKEKQSKEKYTKFKEILENLEKFRIKKKISENGKFFGKITKKQILDLISNKTGGTFELTKNQLELPEMKQVGDYTINIVLNTNIIAKINIKILPE 155          
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: A0A0R6M3Q5_UNDPI (50S ribosomal protein L9, chloroplastic n=27 Tax=Laminariales TaxID=2886 RepID=A0A0R6M3Q5_UNDPI)

HSP 1 Score: 192 bits (487), Expect = 4.200e-60
Identity = 102/155 (65.81%), Postives = 127/155 (81.94%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            MRKKTIQ ILTK+V  LGKQG +IKVKPGYIRNYLIP KLGK+ATPNLINQ+ ++Q++   K+ QF++K    KE++EN  KFTIKKKISENG F+GKITKK +LDLI + +  TI+L K+QLELP MKE+G+Y I I+LTT++I  INI+ILPE
Sbjct:    1 MRKKTIQVILTKDVQKLGKQGTLIKVKPGYIRNYLIPLKLGKIATPNLINQFELQQKESEAKQIQFSKKCAINKELLENSAKFTIKKKISENGIFYGKITKKHVLDLIIDNVDLTIDLNKNQLELPDMKELGEYIIEIVLTTDVIAKINIEILPE 155          
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: A0A8F0FAV2_9PHAE (Ribosomal protein L9 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FAV2_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.710e-59
Identity = 101/155 (65.16%), Postives = 128/155 (82.58%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            MRKKTI+ ILTK+V  LGKQG +IKVKPGYIRNYL+P KL ++AT +LINQ+ ++Q++   K+ QFT+K    KE++ENLEKFTI+KKISENG FFGK+TKKQILDLI  K+  TI+L K+QLELP+MK++G+Y I I LTTN+I  INI+ILPE
Sbjct:    1 MRKKTIKVILTKDVQKLGKQGTLIKVKPGYIRNYLVPLKLAEIATTSLINQFALKQKESEIKQIQFTKKCITNKELLENLEKFTIRKKISENGVFFGKVTKKQILDLIIEKVDLTIDLNKNQLELPEMKQLGNYIIEINLTTNVIAKINIEILPE 155          
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: A0A8F0F875_9PHAE (Ribosomal protein L9 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F875_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.140e-57
Identity = 97/155 (62.58%), Postives = 124/155 (80.00%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            MR KTIQ ILTK+V  LGKQG +IKVKPGY+RNYLIP KLGK+AT  LINQ+ ++Q++   K+KQF++K    +E +E+  KF IKKKISENG FFGKITK  IL+LI +K+  T++L K+QLELP+MK+VG+Y I I+LTTN+I  INI+ILPE
Sbjct:    1 MRNKTIQVILTKDVQKLGKQGTLIKVKPGYLRNYLIPLKLGKVATTTLINQFELQQKESEMKQKQFSKKCINIREELESFGKFIIKKKISENGVFFGKITKSHILELITSKVNLTMDLNKNQLELPEMKQVGEYVIEIILTTNVIAKINIEILPE 155          
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: A0A8F0FAR9_9PHAE (Ribosomal protein L9 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAR9_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 4.630e-57
Identity = 96/155 (61.94%), Postives = 126/155 (81.29%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            MRKKT+Q ILTK+V  LGKQG+++KVKPGY+RNYLIP K  K+AT +LI+Q+N+ Q++L  K+ QF +K    K+ +ENLEK TIKKKISE+G FFGKIT+KQILDLIN+++   +ELTK+QL+LP+MKE+GDY   I+L TN+I  I I+ILPE
Sbjct:    1 MRKKTVQVILTKDVQNLGKQGKLLKVKPGYVRNYLIPLKKAKIATSHLIDQFNLHQKELEIKQIQFIDKCLIVKKSLENLEKLTIKKKISESGVFFGKITQKQILDLINDQVNLKMELTKTQLQLPEMKELGDYVFEIVLATNVIAKIKIEILPE 155          
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: A0A6B7F0C5_9PHAE (50S ribosomal protein L9 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7F0C5_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 8.830e-55
Identity = 94/155 (60.65%), Postives = 122/155 (78.71%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            M KKTIQ ILTK+V  LGKQG +IKVKPGYIRNYLIP KL K+AT NLINQ+  +Q++L  K+ QF++K    KE++E+  KFT KKKISENG F+GKITKK +L+LI N++   IEL K+QLELP+MK++G+Y + + LTTN+   IN++ILPE
Sbjct:    1 MGKKTIQVILTKDVKDLGKQGSLIKVKPGYIRNYLIPLKLAKVATLNLINQFESQQKELDLKQLQFSKKCLSVKELLESFGKFTTKKKISENGVFYGKITKKHVLELITNRVELPIELNKTQLELPEMKKLGEYILEVNLTTNVTAKINLEILPE 155          
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: A0A7T8JK64_SCYLO (50S ribosomal protein L9, chloroplastic n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8JK64_SCYLO)

HSP 1 Score: 177 bits (449), Expect = 2.520e-54
Identity = 95/155 (61.29%), Postives = 120/155 (77.42%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            M KKTIQ ILTK+V  LG QG +IKVKPGYIRNYL+P KL K+AT NLINQ+  +Q++L  K+ QF +K    KE++E+  KFT KKKISENG F+GKITKK IL+LI NK+   I+L K+QLELP+MK++G+Y I I LTTN+   IN++ILPE
Sbjct:    1 MGKKTIQVILTKDVQGLGNQGALIKVKPGYIRNYLMPLKLAKIATINLINQFESQQKELDLKQLQFAKKCLGVKELLESFGKFTTKKKISENGVFYGKITKKHILELITNKVDLPIDLNKNQLELPEMKKLGEYVIEIALTTNVTAKINLEILPE 155          
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: A0A2R4QQ28_9PHAE (50S ribosomal protein L9 n=2 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ28_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 2.390e-52
Identity = 92/155 (59.35%), Postives = 118/155 (76.13%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            M KKTI+ ILTK+++ LG+ G IIK KPGYIRNYLIP K  K+AT N+I+Q+ +EQ+ +  K+KQF ++    KE++ENL KFTI KKI E+G FFGKITKKQILDL+N K+  T E+ K+QLE P+MK +G+Y I I+LT NII  INI IL E
Sbjct:    1 MTKKTIKVILTKSINNLGEHGTIIKAKPGYIRNYLIPKKFAKMATHNVIHQFELEQKAIDMKKKQFLKECNDNKELLENLGKFTIYKKIKEDGIFFGKITKKQILDLLNEKVKLTTEINKTQLEFPEMKRLGNYIIKIILTNNIIAKINIDILAE 155          
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: UPI001FA6A9A6 (ribosomal protein L9 n=1 Tax=Silvetia siliquosa TaxID=93837 RepID=UPI001FA6A9A6)

HSP 1 Score: 171 bits (432), Expect = 9.670e-52
Identity = 91/155 (58.71%), Postives = 119/155 (76.77%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            M KKTI+ ILTK+++ LG+ G +IK KPGYIRNYLIP KL K+AT N+I Q+ ++Q+ +  K+KQF ++    KE++ENL K TI KKI E+G FFGK+TKKQILDL+N K+  TIE+ K+QLE P+MK++G+Y I ILLT NII  INI IL E
Sbjct:    1 MTKKTIKVILTKSINNLGEYGTLIKAKPGYIRNYLIPRKLAKIATHNVIQQFELQQKAIDIKKKQFLKECYDNKELLENLGKLTIYKKIKEDGIFFGKVTKKQILDLLNEKVKLTIEINKTQLEFPEMKQLGNYIIKILLTNNIIVEINIDILAE 155          
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Match: D1J712_ECTSI (50S ribosomal protein L9, chloroplastic n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J712_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 1.950e-51
Identity = 92/155 (59.35%), Postives = 121/155 (78.06%), Query Frame = 0
Query:    1 MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLINQYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKITKKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINIKILPE 155
            M KKTIQ ILTK+V  LGK+G +I+VKPGYIRNYLIP KL K+AT NLINQ+  +Q++L  K+ +F +K  + KE+IE+  KFT KKK+SENG F+GKITKK IL+LI +KI   I+L K+QLELP+MK++G+Y I I LT ++   IN++ILPE
Sbjct:    1 MGKKTIQVILTKDVQKLGKEGTLIRVKPGYIRNYLIPLKLAKVATINLINQFESQQKELDLKQIKFRKKCLEVKELIESYGKFTTKKKVSENGVFYGKITKKHILELITHKIDLGIDLNKNQLELPEMKKLGEYVIEIPLTVDVKAKINLEILPE 155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44709.11273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F7F4_9PHAE9.600e-8081.29Ribosomal protein L9 n=1 Tax=Protohalopteris sp. T... [more]
A0A0R6M3Q5_UNDPI4.200e-6065.8150S ribosomal protein L9, chloroplastic n=27 Tax=L... [more]
A0A8F0FAV2_9PHAE1.710e-5965.16Ribosomal protein L9 n=1 Tax=Chorda asiatica TaxID... [more]
A0A8F0F875_9PHAE1.140e-5762.58Ribosomal protein L9 n=2 Tax=Laminariales TaxID=28... [more]
A0A8F0FAR9_9PHAE4.630e-5761.94Ribosomal protein L9 n=1 Tax=Desmarestia aculeata ... [more]
A0A6B7F0C5_9PHAE8.830e-5560.6550S ribosomal protein L9 n=1 Tax=Cladosiphon okamu... [more]
A0A7T8JK64_SCYLO2.520e-5461.2950S ribosomal protein L9, chloroplastic n=4 Tax=Sc... [more]
A0A2R4QQ28_9PHAE2.390e-5259.3550S ribosomal protein L9 n=2 Tax=Fucus TaxID=3011 ... [more]
UPI001FA6A9A69.670e-5258.71ribosomal protein L9 n=1 Tax=Silvetia siliquosa Ta... [more]
D1J712_ECTSI1.950e-5159.3550S ribosomal protein L9, chloroplastic n=2 Tax=Ec... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036935Ribosomal protein L9, N-terminal domain superfamilyGENE3D3.40.5.10coord: 6..65
e-value: 4.4E-16
score: 60.1
IPR020070Ribosomal protein L9, N-terminalPFAMPF01281Ribosomal_L9_Ncoord: 9..52
e-value: 2.7E-16
score: 58.9
IPR020070Ribosomal protein L9, N-terminalPROSITEPS00651RIBOSOMAL_L9coord: 18..45
IPR020594Ribosomal protein L9, bacteria/chloroplastTIGRFAMTIGR00158TIGR00158coord: 7..155
e-value: 1.3E-30
score: 104.8
IPR020594Ribosomal protein L9, bacteria/chloroplastHAMAPMF_00503Ribosomal_L9coord: 6..155
score: 19.348
IPR036791Ribosomal protein L9, C-terminal domain superfamilyGENE3D3.10.430.100coord: 66..155
e-value: 5.0E-15
score: 57.4
IPR036791Ribosomal protein L9, C-terminal domain superfamilySUPERFAMILY55653Ribosomal protein L9 C-domaincoord: 65..154
IPR020069Ribosomal protein L9, C-terminalPFAMPF03948Ribosomal_L9_Ccoord: 74..152
e-value: 2.0E-15
score: 57.0
NoneNo IPR availablePANTHERPTHR21368:SF1839S RIBOSOMAL PROTEIN L9, MITOCHONDRIALcoord: 3..143
IPR000244Ribosomal protein L9PANTHERPTHR2136850S RIBOSOMAL PROTEIN L9coord: 3..143
IPR009027Ribosomal protein L9/RNase H1, N-terminalSUPERFAMILY55658L9 N-domain-likecoord: 6..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44709contigH-paniculata_contig44709:603..1070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44709.11273.1mRNA_H-paniculata_contig44709.11273.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44709 603..1070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44709.11273.1 ID=prot_H-paniculata_contig44709.11273.1|Name=mRNA_H-paniculata_contig44709.11273.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
MRKKTIQAILTKNVHLLGKQGQIIKVKPGYIRNYLIPSKLGKLATPNLIN
QYNVEQQKLAYKEKQFTEKYTKFKEIIENLEKFTIKKKISENGKFFGKIT
KKQILDLINNKIGGTIELTKSQLELPKMKEVGDYSIPILLTTNIITNINI
KILPE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036935Ribosomal_L9_N_sf
IPR020070Ribosomal_L9_N
IPR020594Ribosomal_L9_bac/chp
IPR036791Ribosomal_L9_C_sf
IPR020069Ribosomal_L9_C
IPR000244Ribosomal_L9
IPR009027Ribosomal_L9/RNase_H1_N