prot_H-paniculata_contig444.11218.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig444.11218.1
Unique Nameprot_H-paniculata_contig444.11218.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: D7G586_ECTSI (Dynein light chain roadblock n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G586_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.620e-60
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0
Query:    1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHSK 98
            MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTY+ALISQLS KANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHSK
Sbjct:    1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYSALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHSK 98          
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: A0A836CL08_9STRA (Dynein light chain roadblock n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL08_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.970e-52
Identity = 82/97 (84.54%), Postives = 92/97 (94.85%), Query Frame = 0
Query:    1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 97
            MSSEVEETLKRIQSHRGVKGVLI+N +GIPIRSN++QEDTDTYAALISQL+ KANGI+RTLDE DSLTFLRLRS KHEIMVAPDKD+ LIV+QNP++
Sbjct:    1 MSSEVEETLKRIQSHRGVKGVLIINQEGIPIRSNMNQEDTDTYAALISQLNFKANGIIRTLDETDSLTFLRLRSQKHEIMVAPDKDFTLIVVQNPNA 97          
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: A0A482SBS1_9ARCH (Roadblock/LC7 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBS1_9ARCH)

HSP 1 Score: 156 bits (394), Expect = 1.050e-47
Identity = 75/97 (77.32%), Postives = 87/97 (89.69%), Query Frame = 0
Query:    1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 97
            MSSEVEETLKRIQSH+GVKGVLI+N +GIPIRSNLS EDT+ YAAL+SQL+ KA+G+VR LDE D L FLR+RS KHEIMVAPDKDY+L+VIQNP+ 
Sbjct:    1 MSSEVEETLKRIQSHKGVKGVLIMNAEGIPIRSNLSPEDTENYAALVSQLAFKASGVVRCLDETDELAFLRIRSKKHEIMVAPDKDYVLVVIQNPNE 97          
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: A0A7S2FUR4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FUR4_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.570e-45
Identity = 72/96 (75.00%), Postives = 87/96 (90.62%), Query Frame = 0
Query:    1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPH 96
            MS+EVEETLKRIQSHRGVKGVLI N++G+PIRSNL  ED  TY+AL+SQL++KAN +VR LDEAD LTFLR+RS KHEIM+APDK+++LIVIQNP+
Sbjct:   38 MSTEVEETLKRIQSHRGVKGVLICNSEGVPIRSNLPAEDEQTYSALVSQLAMKANNVVRNLDEADELTFLRIRSKKHEIMIAPDKEFLLIVIQNPN 133          
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: A0A7S1U8Y1_9STRA (Dynein light chain roadblock n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Y1_9STRA)

HSP 1 Score: 146 bits (368), Expect = 9.670e-44
Identity = 71/93 (76.34%), Postives = 84/93 (90.32%), Query Frame = 0
Query:    1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQ 93
            MS+ VEETLKRIQSHRGVKGVLI+N+DG+PIRS L+QE TD+YAAL+SQL+ KA+ +VRTLDE D LTFLR+RS K EIMVAPD+DY+LIVIQ
Sbjct:    1 MSAAVEETLKRIQSHRGVKGVLIVNSDGVPIRSTLNQESTDSYAALLSQLAFKASSVVRTLDETDGLTFLRIRSNKEEIMVAPDRDYLLIVIQ 93          
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: A0A7S2STB6_9STRA (Dynein light chain roadblock n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STB6_9STRA)

HSP 1 Score: 144 bits (363), Expect = 7.360e-43
Identity = 67/96 (69.79%), Postives = 84/96 (87.50%), Query Frame = 0
Query:    1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPH 96
            MS EVEET+KRIQSHRGVKGV+I N++G+PIRSNL  ED   Y+AL+SQL++KA+ +VRTLDE D L FLR+RS KHE+MVAPDK+++LIVIQNP+
Sbjct:   10 MSMEVEETMKRIQSHRGVKGVVICNSEGVPIRSNLEPEDEQNYSALVSQLAIKASSVVRTLDETDDLAFLRIRSKKHEVMVAPDKEFLLIVIQNPN 105          
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: F0Y4U8_AURAN (Dynein light chain roadblock n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4U8_AURAN)

HSP 1 Score: 143 bits (360), Expect = 1.560e-42
Identity = 69/97 (71.13%), Postives = 84/97 (86.60%), Query Frame = 0
Query:    1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 97
            MSSEVEETL+RIQSHRGVKGVLI++  G+PIRSNL  E+T+TYAAL+SQL++KA+ +VRTLDE D LTF R+RS KHEIM+APD +Y+LIVIQ   S
Sbjct:    1 MSSEVEETLRRIQSHRGVKGVLIVSAQGVPIRSNLENEETNTYAALLSQLAMKASSVVRTLDETDELTFFRIRSKKHEIMIAPDAEYLLIVIQETAS 97          
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: A0A8J2WXW4_9STRA (Dynein light chain roadblock n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXW4_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.120e-40
Identity = 66/93 (70.97%), Postives = 79/93 (84.95%), Query Frame = 0
Query:    1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQ 93
            MSSEVEETLKRIQSHRGVKGVLI++ DG+PIRSNL  ++T TYAAL+SQL+ KA  +VR LD+ D L F R+RS KHEIMVAPD +Y+LIV+Q
Sbjct:    1 MSSEVEETLKRIQSHRGVKGVLIVSADGVPIRSNLDDDETQTYAALLSQLATKARNVVRVLDDQDELAFFRIRSNKHEIMVAPDPEYLLIVVQ 93          
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: A0A1Y2ATV3_9FUNG (Dynein light chain roadblock n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y2ATV3_9FUNG)

HSP 1 Score: 131 bits (330), Expect = 6.550e-38
Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 0
Query:    3 SEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 97
            SEVEET+KR+QSH+GV+G++I+NNDGIPIRS L    T  Y+ALI+QL+ KA  +VR LD  + LTFLR+RS KHEIMVAPDK+YILIVIQNP  
Sbjct:    2 SEVEETIKRLQSHKGVEGIVIVNNDGIPIRSTLDNNLTVQYSALITQLASKARSVVRDLDPQNDLTFLRIRSKKHEIMVAPDKEYILIVIQNPQE 96          
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Match: A0A7J6RB30_PEROL (Dynein light chain roadblock n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RB30_PEROL)

HSP 1 Score: 130 bits (326), Expect = 3.390e-37
Identity = 63/95 (66.32%), Postives = 80/95 (84.21%), Query Frame = 0
Query:    3 SEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 97
            SEVEETL RI++H+GV G++I+N++G+PIRS L Q+ T  Y+ALI+QL+ KA  +VR LD  + LTFLRLRS KHEIMVAPDKDYILIVIQ+PH+
Sbjct:    9 SEVEETLNRIKTHKGVSGIVIVNHEGVPIRSTLEQKYTLQYSALITQLTHKARSVVRDLDPQNDLTFLRLRSKKHEIMVAPDKDYILIVIQDPHA 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig444.11218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G586_ECTSI1.620e-6097.96Dynein light chain roadblock n=2 Tax=Ectocarpus Ta... [more]
A0A836CL08_9STRA1.970e-5284.54Dynein light chain roadblock n=1 Tax=Tribonema min... [more]
A0A482SBS1_9ARCH1.050e-4777.32Roadblock/LC7 domain-containing protein n=1 Tax=ar... [more]
A0A7S2FUR4_9STRA1.570e-4575.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1U8Y1_9STRA9.670e-4476.34Dynein light chain roadblock n=1 Tax=Phaeomonas pa... [more]
A0A7S2STB6_9STRA7.360e-4369.79Dynein light chain roadblock n=1 Tax=Rhizochromuli... [more]
F0Y4U8_AURAN1.560e-4271.13Dynein light chain roadblock n=1 Tax=Aureococcus a... [more]
A0A8J2WXW4_9STRA2.120e-4070.97Dynein light chain roadblock n=1 Tax=Pelagomonas c... [more]
A0A1Y2ATV3_9FUNG6.550e-3867.37Dynein light chain roadblock n=3 Tax=Neocallimasti... [more]
A0A7J6RB30_PEROL3.390e-3766.32Dynein light chain roadblock n=4 Tax=Perkinsus ols... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004942Roadblock/LAMTOR2 domainSMARTSM00960Robl_LC7_a_2coord: 5..93
e-value: 4.0E-24
score: 96.2
IPR004942Roadblock/LAMTOR2 domainPFAMPF03259Robl_LC7coord: 5..94
e-value: 1.8E-26
score: 91.7
NoneNo IPR availableGENE3D3.30.450.30coord: 1..97
e-value: 1.3E-40
score: 139.5
NoneNo IPR availablePANTHERPTHR10779DYNEIN LIGHT CHAIN ROADBLOCKcoord: 2..95
NoneNo IPR availableSUPERFAMILY103196Roadblock/LC7 domaincoord: 3..96
IPR016561Dynein light chain roadblock-type 1/2PIRSFPIRSF009998DLC7coord: 1..97
e-value: 1.3E-37
score: 125.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig444contigH-paniculata_contig444:23856..26236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig444.11218.1mRNA_H-paniculata_contig444.11218.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig444 23128..26523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig444.11218.1 ID=prot_H-paniculata_contig444.11218.1|Name=mRNA_H-paniculata_contig444.11218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQL
SLKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004942Roadblock/LAMTOR2_dom
IPR016561DYNLRB1/2