prot_H-paniculata_contig4439.11214.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4439.11214.1
Unique Nameprot_H-paniculata_contig4439.11214.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
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BLAST of mRNA_H-paniculata_contig4439.11214.1 vs. uniprot
Match: D7FZQ4_ECTSI (Helicase ATP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZQ4_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 2.970e-31
Identity = 61/94 (64.89%), Postives = 73/94 (77.66%), Query Frame = 0 
Query:    1 MVVDRVPCKEGTIPLAELNYFTKNPERAARMDNWSARIKQFQDDLTGMPEEDKMRLPVPVGEPLDSSIFQFVPTVSACHPLNERWTGDQRELFQ 94
            M+VDRVPCK G  PL E+NYFTKNPERAARM++WS  IK FQD LTGMPEEDKMRLPVPVGEPLDSSIFQ + + ++  P+    + D+  L +
Sbjct: 1011 MIVDRVPCKPGDTPLREVNYFTKNPERAARMESWSGIIKDFQDGLTGMPEEDKMRLPVPVGEPLDSSIFQVI-SANSFKPIEPVSSFDKFRLMR 1103
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BLAST of mRNA_H-paniculata_contig4439.11214.1 vs. uniprot
Match: A0A836CAV0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV0_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 5.110e-13
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 0 
Query:    2 VVDRVPCKEGTIPLAELNYFTKNPERAARMDNWSARIKQFQDDLTGMPEEDKMRLPVPVGEPLDSSIFQFVPTVSACHPLNE 83
            ++DRVP + G  PL E  +F K P+R ARM+ +  R+++ Q  L G+PEE KM+LPVP+ +PLDS +F  V   S   PL +
Sbjct:  964 LIDRVPMEPGGTPLQEHPFFMKAPDRNARMEEFLKRLEEQQQLLVGLPEEGKMKLPVPLDQPLDSRVFAIV-LASGYAPLGQ 1044
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4439.11214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZQ4_ECTSI2.970e-3164.89Helicase ATP-binding domain-containing protein n=2... [more]
A0A836CAV0_9STRA5.110e-1345.12P-loop containing nucleoside triphosphate hydrolas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4439contigH-paniculata_contig4439:8610..12352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4439.11214.1mRNA_H-paniculata_contig4439.11214.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4439 8192..12381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4439.11214.1 ID=prot_H-paniculata_contig4439.11214.1|Name=mRNA_H-paniculata_contig4439.11214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
MVVDRVPCKEGTIPLAELNYFTKNPERAARMDNWSARIKQFQDDLTGMPE
EDKMRLPVPVGEPLDSSIFQFVPTVSACHPLNERWTGDQRELFQAD*
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