prot_H-paniculata_contig4426.11187.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4426.11187.1
Unique Nameprot_H-paniculata_contig4426.11187.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length515
Homology
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BLAST of mRNA_H-paniculata_contig4426.11187.1 vs. uniprot
Match: D7FY22_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY22_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.490e-5
Identity = 21/40 (52.50%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:    3 RRCSDHGCSTTPSFGSEGSRKAEYCAQHARAGMVNVTKQQ 42
            R C +HGC+  PS+G +GS+KAE+C++H++ GM NVTK++
Sbjct:   29 RCCQEHGCTARPSYGIDGSKKAEFCSKHSKPGMTNVTKKR 68
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4426.11187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY22_ECTSI1.490e-552.50EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4426contigH-paniculata_contig4426:1144..2802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4426.11187.1mRNA_H-paniculata_contig4426.11187.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4426 1044..3229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4426.11187.1 ID=prot_H-paniculata_contig4426.11187.1|Name=mRNA_H-paniculata_contig4426.11187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=515bp
MPRRCSDHGCSTTPSFGSEGSRKAEYCAQHARAGMVNVTKQQCCNEGCSK
QALVGFESNRKAEYCAQHARAGMVDVKSSMCGNEGCSKQPSFSSAGGRKA
EYCAQHATAGMVRVTNRICGNEGCYTRSSFGFESNRKAEYCAQHARAGMV
NVTNRMCGNEGCSRRPSFGFEGSRKAEFCAQHATAGMVNVTKQKCCNKGC
SKQASVGFEGSRKVEYCAQHARAGMVKVKNNKCGNEGCSRRPSFGFEGSR
KAEYCARHSRAGMVDVKSNKCGNEDCSKQPSFGSAGSRKTEYCAQHAEAS
VEDMKSGKCGNEGCSKRKVHVIQGIRNKSCTLYAEMEITRVSDGSKYPKY
STSNRDLIEDGVDSVAHGLGQHVKHHGGIYSGASSLDGSCREVHSDAGWG
GETTARVSGQPASVMTGVVYADSEVAVKLDLRMSSVCVAYGIGKRSEPFA
PASSSRGSCSGDGSSSSQRSKRVRRTAQEASRHLLAEAESVAKEVKNEVK
LELVASAATSCSDQ*
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