prot_H-paniculata_contig439.11130.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig439.11130.1
Unique Nameprot_H-paniculata_contig439.11130.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length280
Homology
BLAST of mRNA_H-paniculata_contig439.11130.1 vs. uniprot
Match: A0A6H5K0Q6_9PHAE (GH95 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q6_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 6.600e-87
Identity = 136/249 (54.62%), Postives = 173/249 (69.48%), Query Frame = 0
Query:   35 KKLRSPLDE--TVDAKKP--LRTALPGVDFKGGDLPGVGGLRVNSHEECCELCEKDGLCLKWTLELDSGFCWLKGMGGQRADGVSGLISGLVRAEEDHTMQRPQYKRTGKSRKSVPTPKPLQCCPEGADRAPPGVHDLDIWDDRPGADWTTSYMLGNGHLGAIVGMGTSQDTIYLSDAGLWAGKGKHE-GASTF--PQSPDRYEHFKKAREALLKGNIRTADAEAGKMPTSPDGFVSSFEYAGELHLDF 276
            + +R+P +   T   KKP  L++    VD+KGGD+ GVG L V   +EC  LC +DG CLKWTL+L    CWLK  GG R + V GL SG+VR EED T+ +P+Y   GK     P P PLQCCP+ A   P GVH LD+WDD PG+DWTTSY LGNG+LGA++GM T +DT+++S   LW+GKGKH+ G +TF  P SPDRY+ F+ ARE+LL G++  A   AG+MPTSP+GFV SFEYAGEL L+F
Sbjct:   47 RSIRTPKERPSTATVKKPALLKSVYHSVDYKGGDIQGVGPLNVEDEKECRSLCVRDGRCLKWTLQLKEMVCWLKDAGGTRNEDVPGLTSGVVRDEEDTTIPKPRY---GKE----PPPPPLQCCPDAAGEPPAGVHALDLWDDEPGSDWTTSYALGNGYLGAMLGMRTFKDTMFMSHGSLWSGKGKHKAGGATFDFPLSPDRYDKFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAGELLLEF 288          
BLAST of mRNA_H-paniculata_contig439.11130.1 vs. uniprot
Match: D7FKT5_ECTSI (Alpha-L-fucosidase, family GH95 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT5_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 1.310e-76
Identity = 127/229 (55.46%), Postives = 157/229 (68.56%), Query Frame = 0
Query:   51 LRTALPGVDFKGGDLPGVGGLRVNSHEECCELCEKDGLCLKWTLELDSGFCWLKGMGGQRADGVSGLISGLVRAEEDHTMQRPQYKRTGKSRKSVPTPKPLQCCPEGADRAPPGVHDLDIWDDRPGADWTTSYMLGNGHLGAIVGMGTSQDTIYLSDAGLWAGKGKHEGA---STFPQSPDRYEHFKKAREALLKGNIRTADAEAGKMPTSPDGFVSSFEYAGELHLDF 276
            L++    VD+KGGD+ GVG L V   +EC  LC +DG CLKWTL+L    CWLK  GG R +GV GL SG+VR EED T+ +P+Y   GK     P        P+ A   P GVH LD+WDD PGADWTTSY LGNG+LGA++GMGT +DT+++S   LWAGKGK +     S FP SPDRY+ F+ ARE+LL G++  A   AG+MPTSP+GFV SFEYAGELHL+F
Sbjct:  146 LKSVYHSVDYKGGDIQGVGPLNVEDEKECRSLCVRDGRCLKWTLQLKEMICWLKDAGGTRNEGVPGLRSGVVRDEEDKTIPKPRY---GKE----PXXXXXXXXPDAAAEPPAGVHALDVWDDEPGADWTTSYALGNGYLGAMLGMGTFKDTMFMSHGSLWAGKGKLKAGGATSGFPLSPDRYDKFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAGELHLEF 367          
BLAST of mRNA_H-paniculata_contig439.11130.1 vs. uniprot
Match: A0A7S3JVL2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVL2_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.310e-14
Identity = 75/269 (27.88%), Postives = 118/269 (43.87%), Query Frame = 0
Query:   40 PLDETV--DAKKPLRTALPGVDFKGGDLPGVGGLRVNSHEECCELCEKDGLCLKWTLELDSGFCWLKGMGGQRADG---VSGLISGLVRAEEDHTMQRPQYKRTGKSRKSVPTPKPLQCCPEGADRAPPGVHDLDIWDDRPGADWTTSYMLGNGHLGAIVGM-------GTSQDTIYLSDAGLWAGKGKHEGASTF---------------------PQSPDRYEHFKKAREALLKGNIRTADAEAGKMPTSPDGFVSSFEYAGELHLD 275
            PL E +  +  KP  T L G+D +GGD+  V  L++N+ EECC  C     C  WT   + G CWLKG  G+R       SGL+   ++ E    + +    R  + ++SV   +P  C     D       +L ++      DW+ ++ LGNG LGA+VG+         +++T++   + +   K K +                          P +P  +E F+ +R ALL GNI+ A   A  +   P   V SFE    L+ +
Sbjct:  110 PLSEKLLSNCSKP-ETWLSGIDLRGGDIQNVP-LKMNA-EECCNACAARSQCAAWTAVENDGSCWLKGRLGRRIAAKSMTSGLLRNAIQIEAVPEVPQAVMPREARKKQSV---RP-HCRHTSKD-------ELRLFYKAAARDWSEAFPLGNGKLGALVGLEPWSGRVAIAEETLFERRSDIEEAKAKRQAREATERAARAEKNKSTADDKKWLSKPATP--FEAFQISRNALLNGNIKAAQEAARWLDAGP---VPSFEGLATLNFE 359          
BLAST of mRNA_H-paniculata_contig439.11130.1 vs. uniprot
Match: A0A1N6ETZ4_9BACT (Alpha-L-fucosidase 2 n=1 Tax=Chitinophaga niabensis TaxID=536979 RepID=A0A1N6ETZ4_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 2.210e-5
Identity = 29/82 (35.37%), Postives = 45/82 (54.88%), Query Frame = 0
Query:  168 LDIWDDRPGADWTTSYMLGNGHLGAIVGMGTSQDTIYLSDAGLWAGKGKHEGASTFPQSPDRYEHFKKAREALLKGNIRTAD 249
            L +W  +P   WT +  +GNG LGA+V     ++ I+L++  LW+G     G +    +P   E   K REAL KG+ +TA+
Sbjct:   23 LKLWYKQPADKWTEAMPVGNGRLGAMVFGRPQEELIHLNEESLWSG-----GPANLNPNPQAPEFLPKVREALFKGDYKTAE 99          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig439.11130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K0Q6_9PHAE6.600e-8754.62GH95 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FKT5_ECTSI1.310e-7655.46Alpha-L-fucosidase, family GH95 n=1 Tax=Ectocarpus... [more]
A0A7S3JVL2_9STRA3.310e-1427.88Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1N6ETZ4_9BACT2.210e-535.37Alpha-L-fucosidase 2 n=1 Tax=Chitinophaga niabensi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.4.10coord: 44..125
e-value: 1.2E-8
score: 36.8
NoneNo IPR availableGENE3D2.70.98.50coord: 169..280
e-value: 1.2E-14
score: 56.6
NoneNo IPR availablePANTHERPTHR31084FAMILY NOT NAMEDcoord: 166..276
NoneNo IPR availablePANTHERPTHR31084:SF12coord: 166..276
IPR003609PAN/Apple domainPFAMPF14295PAN_4coord: 58..104
e-value: 4.4E-8
score: 32.9
IPR027414Glycosyl hydrolase family 95, N-terminal domainPFAMPF14498Glyco_hyd_65N_2coord: 170..276
e-value: 2.9E-16
score: 60.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig439contigH-paniculata_contig439:18721..27557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig439.11130.1mRNA_H-paniculata_contig439.11130.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig439 18714..27557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig439.11130.1 ID=prot_H-paniculata_contig439.11130.1|Name=mRNA_H-paniculata_contig439.11130.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp
MPAGLRSSPPRKKRGGGRLIPPVVGEGVVSDEEDKKLRSPLDETVDAKKP
LRTALPGVDFKGGDLPGVGGLRVNSHEECCELCEKDGLCLKWTLELDSGF
CWLKGMGGQRADGVSGLISGLVRAEEDHTMQRPQYKRTGKSRKSVPTPKP
LQCCPEGADRAPPGVHDLDIWDDRPGADWTTSYMLGNGHLGAIVGMGTSQ
DTIYLSDAGLWAGKGKHEGASTFPQSPDRYEHFKKAREALLKGNIRTADA
EAGKMPTSPDGFVSSFEYAGELHLDFLADS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
IPR027414GH95_N_dom