prot_H-paniculata_contig4379.11109.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4379.11109.1
Unique Nameprot_H-paniculata_contig4379.11109.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
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BLAST of mRNA_H-paniculata_contig4379.11109.1 vs. uniprot
Match: A0A6H5KJS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS3_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 3.140e-7
Identity = 36/94 (38.30%), Postives = 46/94 (48.94%), Query Frame = 0 
Query:    1 VLGLPGDAHARFHRRQS----WNDVVAAYRPLFQHVHATPVHVLLRLANERLYVAPHVQEYLVALHPNWQRTLAQWTHDVNAALGNGGDPHAPF 90
            V G+    +  F R ++    W+ +V  YR  F      P  VLLRL   R+Y+APHVQEYLV L    +  L  +T  V  AL N   P  PF
Sbjct:   39 VFGMDRSVYIYFPRGRNEDNGWDRLVQRYRSTFYAHGIRPYQVLLRLPRGRIYIAPHVQEYLVHLDQECESHLTFYTVAVQNALRNPAQPLPPF 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4379.11109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJS3_9PHAE3.140e-738.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4379contigH-paniculata_contig4379:14171..14509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4379.11109.1mRNA_H-paniculata_contig4379.11109.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4379 14171..14510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4379.11109.1 ID=prot_H-paniculata_contig4379.11109.1|Name=mRNA_H-paniculata_contig4379.11109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
VLGLPGDAHARFHRRQSWNDVVAAYRPLFQHVHATPVHVLLRLANERLYV
APHVQEYLVALHPNWQRTLAQWTHDVNAALGNGGDPHAPFQVSRNRDGDE
DGGSEANAGTGGR
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