prot_H-paniculata_contig43620.11088.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43620.11088.1
Unique Nameprot_H-paniculata_contig43620.11088.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length153
Homology
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BLAST of mRNA_H-paniculata_contig43620.11088.1 vs. uniprot
Match: A0A6H5JRI0_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRI0_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 4.530e-55
Identity = 86/114 (75.44%), Postives = 104/114 (91.23%), Query Frame = 0 
Query:   40 ESAHDAQRRVLSLTLDGCGLIRRIGKSMKFPVRVMLTAFHLFHHYQWCGSVEAFRFPPSSLPAVCLACLVAATKAEDCNAKLDTLLKEMRQLEPLLPPMDGVFPLGKRPDTKEV 153
            ES  + QR+ LSLTLDGCGLIRRIGK+M+FPVRVMLTAFHLFHHYQWCGSV +F+F P  LPAVCLACL+AATKAEDCNAKL+ +L++M+QLEP+LPP++G+FPLG+RP +KEV
Sbjct:  371 ESPQELQRKALSLTLDGCGLIRRIGKAMRFPVRVMLTAFHLFHHYQWCGSVSSFKFSPPKLPAVCLACLLAATKAEDCNAKLEVMLQQMKQLEPILPPLEGIFPLGQRPTSKEV 484
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BLAST of mRNA_H-paniculata_contig43620.11088.1 vs. uniprot
Match: D7FYQ1_ECTSI (CID domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ1_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 1.680e-53
Identity = 85/114 (74.56%), Postives = 101/114 (88.60%), Query Frame = 0 
Query:   40 ESAHDAQRRVLSLTLDGCGLIRRIGKSMKFPVRVMLTAFHLFHHYQWCGSVEAFRFPPSSLPAVCLACLVAATKAEDCNAKLDTLLKEMRQLEPLLPPMDGVFPLGKRPDTKEV 153
            ES  + QR+ LSLTLDGCGLIRRIGK+M+FP RVMLTAFHLFHHYQWCG V +F+F P  LPAVCLACL+AATKAEDCNAKL+ +L +MRQLEP+LPP++G+FPLG+RP +KEV
Sbjct:  367 ESPQELQRKALSLTLDGCGLIRRIGKAMRFPGRVMLTAFHLFHHYQWCGLVSSFKFSPPKLPAVCLACLLAATKAEDCNAKLEVMLHQMRQLEPILPPLEGIFPLGQRPTSKEV 480
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BLAST of mRNA_H-paniculata_contig43620.11088.1 vs. uniprot
Match: A0A836CAK0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK0_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.850e-17
Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0 
Query:   52 LTLDGCGLIRRIGKSMKFPVRVMLTAFHLFHHYQWCGSVEAFRFPPSSLPAVCLACLVAATKAEDCNAKLDTLLKEMRQLEPLLPP 137
            L +D C +IR IG++M++  R ML+AFH FHH+ W        +P + LPAVCLACL  A KAED   ++D L+    Q++  LPP
Sbjct:    2 LKMDACAMIRHIGRAMRYGERAMLSAFHFFHHFHWVSLDAGQMWPATDLPAVCLACLHLAGKAEDTAFRIDYLMDIADQMKMALPP 87
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43620.11088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRI0_9PHAE4.530e-5575.44CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYQ1_ECTSI1.680e-5374.56CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CAK0_9STRA2.850e-1745.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 36..152
e-value: 3.3E-11
score: 45.0
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 51..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43620contigH-paniculata_contig43620:481..1669 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43620.11088.1mRNA_H-paniculata_contig43620.11088.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43620 481..1669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43620.11088.1 ID=prot_H-paniculata_contig43620.11088.1|Name=mRNA_H-paniculata_contig43620.11088.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp
GAGGGGGVANTVTPSPEGSQTEIASPDGGGVGAGVMGSKESAHDAQRRVL
SLTLDGCGLIRRIGKSMKFPVRVMLTAFHLFHHYQWCGSVEAFRFPPSSL
PAVCLACLVAATKAEDCNAKLDTLLKEMRQLEPLLPPMDGVFPLGKRPDT
KEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf