prot_H-paniculata_contig43274.11039.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: UPI0007382E13 (uncharacterized protein LOC107046765 n=1 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007382E13) HSP 1 Score: 92.4 bits (228), Expect = 7.850e-18 Identity = 66/220 (30.00%), Postives = 106/220 (48.18%), Query Frame = 0
Query: 19 SKSHVHWIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVEGLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQRVQAAKRDTGKEVKGLRLFSKDCTTPKNNEKRQQVVDTKLLRERLGHV-RDFPTVARQ---QGTRLSGK--LGVCSACEKGKASKQPVKKVSRRANDRAALWALKQFERDVARANGLRIKRLRSDQGGEYT 232
S ++ W++DSG A H++PQR++F+NFRQ IVTA E L+ +G GD+E + ++ +V+YVP A+ ++LS+ +Q + AK E G+ D + + D L RLGH+ R + + + G + + C C KGK ++P + RR+ LK+F R G ++K LR+D G EY
Sbjct: 292 SITNADWVIDSG-ASSHISPQREVFRNFRQQAAVGIVTADETVLEADGIGDIEVPVCMNGEPTTLLVRDVLYVPRAATNLLSINNNDNQVIAIAK-----ETCGIYKLDVDRQIVYHVSQSTTTDDGILWHRRLGHLNRGYMKLLKNVLATGVEYDERTIINPCDDCVKGKQHREPFQPSHRRSRKNQVAKKLKEFIGFYERQTGEKVKTLRTDNGTEYV 505
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: A0A6A2ZTQ6_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZTQ6_HIBSY) HSP 1 Score: 74.3 bits (181), Expect = 1.300e-11 Identity = 63/236 (26.69%), Postives = 108/236 (45.76%), Query Frame = 0
Query: 18 SSKSHVHWIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVEGLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQRVQAAKRDTGKEVKGLRLFSKDCTTPKNNEKRQQV--------VDTKLLRERLGHVRDFPTVARQQGTRLSGKLGVCSACEKGKASKQPVKKVSRRANDRAALWALK---------QFERDVARANGLRIKRLRSDQGGEYTGKPF 236
S+ W++DS C+ HH+TP R+ F +F+++ + TA LD G G + + +G+IR + V YVP+ +++SVG + S+ ++ +D +R+ S K KR V V T + T +R + KL C C KGK ++ VK + + + ++ +K ++++ + G +IKRLR+D GGEY PF
Sbjct: 228 STSCSSSWLLDSACS-HHMTPNREWFFDFKELKGGIVYTANNSPLDTLGIGSIR--LRNQDGSIRTL-TGVHYVPDLMRNLISVGTLESKGLEVRAKDGI-----MRIISGALVIMKGIRKRNNVYYFLGSTIVGTAAVAASTDEQESEATRSRIIEGARACKLAFCEHCIKGKKTR--VKFGTAIHDTKVWVYPMKTKEVLGFFLKWKKMMETQTGRKIKRLRTDNGGEYKNDPF 452
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: A0A6A3BUJ7_HIBSY (Photosystem II reaction center Psb28 protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BUJ7_HIBSY) HSP 1 Score: 65.1 bits (157), Expect = 1.860e-8 Identity = 63/244 (25.82%), Postives = 108/244 (44.26%), Query Frame = 0
Query: 25 WIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVEGLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQRVQAAKRD-TGKEVKGLRLFSKDCTTPKN-----------------NEKRQQVVDTKLLRERLGHVRDFPTVARQQGTRLSG----KLGVCSACEKGKASKQPVKKVSRRANDRAALWALKQ----------FERDVARANGLRIKRLRSDQGGEYTGKPF 236
W +D C+ HH+TP R+ F +F+++ + T LD G G + + +G+IR + +V YVP+ +++SVG + S+ ++ +D + + G + K N + Q+ T+L RLGHV + L+G KL C C KGK K VK + + + ++ +K+ +++ V G +IKRLR++ GGEY F
Sbjct: 291 WPLDLTCS-HHMTPTREWFFDFKELKGGIVYTTNNSPLDTLGIGSIR--LRNQDGSIRTL-TSVHYVPDLMRNLISVGTLESKGLEMRAKDGIMRIISGALVIMKGIRKRNNVYYFLGSIIVETAVVAASTDEQESEATRLWHMRLGHVSEKSLKLLIDQGLLNGARACKLVFCEHCIKGK--KMRVKFGTSIHDTKEWVYTMKKKDEVLGFFLKWKKMVETQTGRKIKRLRTNNGGEYKNDQF 528
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: A0A438JGD9_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JGD9_VITVI) HSP 1 Score: 64.7 bits (156), Expect = 2.340e-8 Identity = 69/250 (27.60%), Postives = 102/250 (40.80%), Query Frame = 0
Query: 25 WIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVE-----GLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQ-RVQAAKRDTGKEVKGLRLFSKDCTT--------PKNN-EKRQQVVDTKLLRERLGHVRDFPTVARQQGTRL---SGKL--------GVCSACEKGKASKQPVKKVSRRANDRAA------LW------ALKQFERDVARANGLRIKRLRSDQGGEYTGKPF 236
W++DSG A H TP R++ QN+ + A LDV G GDV G +W E V ++P+ +++SVG++ + T K KG+R+ ++ T P++ DT L RLGH+ ++G ++ GKL +C +C GK K K R LW +L + E V GL++K LRSD GGEY F
Sbjct: 286 WVLDSG-ASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLE--------KVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGVRVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHM-------SEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGEVEGMVETETGLKVKCLRSDNGGEYIDGGF 519
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: A0A438EJ23_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EJ23_VITVI) HSP 1 Score: 63.9 bits (154), Expect = 4.210e-8 Identity = 68/253 (26.88%), Postives = 102/253 (40.32%), Query Frame = 0
Query: 25 WIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVE-----GLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQ-RVQAAKRDTGKEVKGLRLFSKDCTT--------PKNN-EKRQQVVDTKLLRERLGHVRDFPTVARQQGTRL---SGKL--------GVCSACEKGKASKQPVKKVSRRANDR---------------AALWALKQFERDVARANGLRIKRLRSDQGGEYTGKPF 236
W++DSG A H TP R++ QN+ + A LDV G GDV G +W E V ++P+ +++SVG++ + T K KG R+ ++ T P++ DT L RLGH+ ++G ++ GKL +C +C GK K K R A+L K+++ V GL++K LRSD GGEY F
Sbjct: 200 WVLDSG-ASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLE--------KVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHM-------SEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLRRFKKWKAMVETETGLKVKCLRSDNGGEYIDGGF 436
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: A0A438H6F1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438H6F1_VITVI) HSP 1 Score: 63.9 bits (154), Expect = 4.590e-8 Identity = 68/253 (26.88%), Postives = 102/253 (40.32%), Query Frame = 0
Query: 25 WIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVE-----GLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQ-RVQAAKRDTGKEVKGLRLFSKDCTT--------PKNN-EKRQQVVDTKLLRERLGHVRDFPTVARQQGTRL---SGKL--------GVCSACEKGKASKQPVKKVSRRANDRAA------LWA---------LKQFERDVARANGLRIKRLRSDQGGEYTGKPF 236
W++DSG A H TP R++ QN+ + A LDV G GDV G +W E V ++P+ +++SVG++ + T K KG R+ ++ T P++ DT L RLGH+ ++G ++ GKL +C +C GK K K+ R LW K+++ V GL++K LRSD GGEY F
Sbjct: 240 WVLDSG-ASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLE--------KVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHM-------SEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKIGRTPKAEKLELVHTDLWGPSPVASPRRFKKWKAMVETETGLKVKCLRSDNGGEYIDGGF 476
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: A5BJP3_VITVI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BJP3_VITVI) HSP 1 Score: 63.5 bits (153), Expect = 6.340e-8 Identity = 63/236 (26.69%), Postives = 107/236 (45.34%), Query Frame = 0
Query: 25 WIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVEGLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQRVQAAKRDTG-KEVKGLRLFSKDCTTPKNNEKRQQVVDT----KLLRERLGHVRDFPTVARQQGTRLSG----KLGVCSACEKGKASKQPVKKV--SRRANDRAA-LWA------------LKQFERDVARANGLRIKRLRSDQGGEYTGKPF 236
W++DSG A H TP++D F ++ + +G G GDV + T+ G + + NV ++P+ +++S+G++ + RD+ K +G D + VVD +L RLGH+ + + + LSG L C+ C GK ++ K + +R+ D + +W KQF V R +G ++K +R+D GGEY+G PF
Sbjct: 161 WVIDSG-ASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDV--CLETSNGTM-LTLKNVKHIPDIRMNLISIGKLDDEGFCNTFRDSQWKLTRGSMARVIDSSI--------NVVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLHHTRKPGDHSRKIWVYTLKTKYQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSG-PF 383
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: A5C6L3_VITVI (CCHC-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5C6L3_VITVI) HSP 1 Score: 62.8 bits (151), Expect = 1.130e-7 Identity = 63/237 (26.58%), Postives = 99/237 (41.77%), Query Frame = 0
Query: 25 WIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVE-----GLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQ-RVQAAKRDTGKEVKGLRLFSKDCTT--------PKNN-EKRQQVVDTKLLRERLGHVRDFPTVARQQGTRL---SGKLGVCSACEKGKASKQPVKKVSRRA-------NDRAALWALKQFERDVARANGLRIKRLRSDQGGEYTGKPF 236
W++DSG A H TP R++ QN+ + A LDV G GDV G +W E V ++P+ +++SVG++ + T K KG R+ ++ T P++ DT L RLGH+ ++G ++ GKL + + K ++K +R N K+++ V GL++K LRSD GGEY F
Sbjct: 286 WVLDSG-ASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLE--------KVRHIPDLXRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHM-------SEKGMKMLLSKGKLPELKSIDFDMCEKLHLRKAKKRKVWVYFLKNKSDVFVTFKKWKVMVETETGLKVKCLRSDNGGEYIDGGF 506
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: A0A438D4U2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438D4U2_VITVI) HSP 1 Score: 62.4 bits (150), Expect = 1.440e-7 Identity = 63/233 (27.04%), Postives = 93/233 (39.91%), Query Frame = 0
Query: 25 WIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVE-----GLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQ-RVQAAKRDTGKEVKGLRLFSKDCTT--------PKNN-EKRQQVVDTKLLRERLGHVRDFPTVARQQGTRLSGKLGVCSACEKGKASKQPVKKVSRRANDRAALW------ALKQFERDVARANGLRIKRLRSDQGGEYTGKPF 236
W++DSG A H TP R++ QN+ + A LDV G GDV G +W E V ++P+ +++SVG++ + T K KG R+ ++ T P++ DT L RLGH+ + G+ KGK + K + LW +L + E V GL++K LRSD GGEY F
Sbjct: 95 WVLDSG-ASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLE--------KVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSE---------------KGMKMLLSKGKLPELKTPKAEKLELVHTDLWGPSPVASLGEVEGMVETETGLKVKCLRSDNGGEYIDGGF 303
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Match: A0A438CHE4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CHE4_VITVI) HSP 1 Score: 62.4 bits (150), Expect = 1.470e-7 Identity = 64/238 (26.89%), Postives = 100/238 (42.02%), Query Frame = 0
Query: 25 WIVDSGCAGHHLTPQRDLFQNFRQVVRSPIVTAGEGELDVEGQGDVE-----GLIWTAEGAIRIIFCNVVYVPEASDSILSVGRMVSQ-RVQAAKRDTGKEVKGLRLFSKDCTT--------PKNN-EKRQQVVDTKLLRERLGHVRDFPTVARQQGTRL---SGKL--------GVCSACEKGKASKQPVKKVSRRANDRAALWALKQFERDVARANGLRIKRLRSDQGGEYTGKPF 236
W++DSG A TP R++ QN+ + A LDV G GDV G +W E V ++P+ +++SVG++ + T K KG R+ ++ T P++ DT L RLGH+ ++G ++ GKL +C +C GK K+ + +D K+++ V GL++K LRSD GGEY F
Sbjct: 47 WVLDSG-ASFDTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGFVWLLE--------KVRHIPDLMRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTDTLYMTSCPRDTIAVADASTDTSLWHRRLGHM-------SEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKKVWVYFLKNKSD--VFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGF 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43274.11039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig43274.11039.1 ID=prot_H-paniculata_contig43274.11039.1|Name=mRNA_H-paniculata_contig43274.11039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bpback to top |