prot_H-paniculata_contig4292.10973.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4292.10973.1
Unique Nameprot_H-paniculata_contig4292.10973.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: D7G6C8_ECTSI (L51_S25_CI-B8 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C8_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.340e-51
Identity = 80/115 (69.57%), Postives = 94/115 (81.74%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGMPRSPMQPLFRSVPQDVVEA 115
            MAWRASLSRN+RELRFCCCN+S S + VR F+++NYAELK LNP FPILLREG+G  PYL+ATYDYGVE +L LSGLS+E IAK+VE AVE G+ +P SPMQP FRS     V+A
Sbjct:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKALNPGFPILLREGTGADPYLLATYDYGVEHRLSLSGLSQENIAKEVEKAVEKGSSLPLSPMQPSFRSASAGAVKA 115          
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: A0A0D6R4M3_ARACU (L51_S25_CI-B8 domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R4M3_ARACU)

HSP 1 Score: 107 bits (268), Expect = 3.550e-28
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGMPRS 99
            MAWRA LSRNL+ELR   C VS SS+  R+F +SNY +LKTLNP FPIL+RE SG  P + A Y YG+E+ + L GL+E +I K+VE  V++G  +  S
Sbjct:    1 MAWRAQLSRNLKELRIHLCQVSPSSAATRDFIRSNYKDLKTLNPKFPILIRECSGIEPRIWARYQYGIEKSVALDGLTEGQITKKVEELVKDGVNISAS 99          
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: W1PFD0_AMBTC (L51_S25_CI-B8 domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PFD0_AMBTC)

HSP 1 Score: 105 bits (262), Expect = 2.580e-27
Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGM 96
            MAWR  LSRNL+ELR   C  S +S+  R F Q NY +LKTLNP FPIL+RE SG  P L A YD+GVE+ + L GL+E +I K++E  V+ GAG+
Sbjct:    1 MAWRGHLSRNLKELRVLFCQTSPASASTREFVQRNYTDLKTLNPTFPILVRECSGVEPQLWARYDFGVERCVRLEGLTETQITKKLEELVKVGAGL 96          
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: UPI001CC74C30 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001CC74C30)

HSP 1 Score: 105 bits (262), Expect = 2.580e-27
Identity = 52/96 (54.17%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGM 96
            MAWR  LSRNL+E+RF  C  S +SS+ R F Q NY +LKTLNP FPIL+RE +G  P L A YD GVE+ +PL GL+E +I K ++  V+ GA +
Sbjct:    1 MAWRGHLSRNLKEIRFLFCQTSPASSQTREFVQRNYKDLKTLNPKFPILIRECNGVQPQLWARYDMGVERGIPLEGLTEAQINKALQDLVQLGASL 96          
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: A0A5J5APT5_9ASTE (L51_S25_CI-B8 domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5APT5_9ASTE)

HSP 1 Score: 103 bits (257), Expect = 1.480e-26
Identity = 53/94 (56.38%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGA 94
            MAWR  LSRNL+ELR C C  S +SS  R F + NY +LKTLNP FPIL+RE +G  P L A YD GVE+ + L GL+E +I+K VE  V+ GA
Sbjct:    1 MAWRGHLSRNLKELRICFCQTSPASSSARAFIERNYKDLKTLNPKFPILIRECNGIEPQLWARYDMGVERGIRLEGLTEVQISKAVEELVKVGA 94          
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: UPI0001982B0E (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 n=2 Tax=Vitis TaxID=3603 RepID=UPI0001982B0E)

HSP 1 Score: 103 bits (257), Expect = 1.480e-26
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGM 96
            MAWR  LSRNL+ELR   C  S +SS  R F + NY +LKTLNP FPIL+RE +GT P L A YD GVE+ + L GL+EE+I+K VE   + GA +
Sbjct:    1 MAWRGQLSRNLKELRILFCQTSPASSSARAFVERNYKDLKTLNPKFPILIRECNGTRPQLWARYDMGVERGIHLEGLTEEQISKAVEDLAKLGAAL 96          
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: A0A1R3HLH0_COCAP (L51_S25_CI-B8 domain-containing protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3HLH0_COCAP)

HSP 1 Score: 102 bits (255), Expect = 3.540e-26
Identity = 52/96 (54.17%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGM 96
            MAWR+ LSRNL+ELR   C  S SS+  R+F +SNY ELKTLNP  PIL+RE SG  P + A YD G+E+ + L GL+E +I+K +E  VE GA +
Sbjct:    1 MAWRSQLSRNLKELRILFCQKSPSSAPTRSFVESNYKELKTLNPKLPILIRECSGIEPQIWARYDMGIERGIRLEGLTEPQISKALEDLVEAGASL 96          
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: A0A3S3MVY3_9MAGN (NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3MVY3_9MAGN)

HSP 1 Score: 101 bits (252), Expect = 8.530e-26
Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGM 96
            MAWR  LSRNL+ELRF  C  S +S++ R F   NY +LKTLNP FPIL+RE SG  P + A YD GVE+ + L GL+E +I++++E  V+ GA +
Sbjct:    1 MAWRGHLSRNLKELRFLFCQTSPASAQAREFVHRNYKDLKTLNPKFPILIRECSGVDPQIWARYDMGVERCVHLDGLTEAQISRKLEELVKAGAAL 96          
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: A0A6J0ZVW3_9ROSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 n=2 Tax=Byttnerioideae TaxID=214909 RepID=A0A6J0ZVW3_9ROSI)

HSP 1 Score: 101 bits (251), Expect = 1.210e-25
Identity = 51/96 (53.12%), Postives = 66/96 (68.75%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGM 96
            MAWR  LSRNL+ELR   C  SD+S+  R+F + NY +LKTLNP FPIL+RE SG  P + A YD GVE+ + L GL+E +I K +E  V+ GA +
Sbjct:    1 MAWRGQLSRNLKELRILFCQKSDASACARSFVEKNYKDLKTLNPKFPILIRECSGIEPQMWARYDMGVERGIRLEGLTEPQILKTLEDLVKAGASL 96          
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Match: A0A2I4FC77_JUGRE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like n=6 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4FC77_JUGRE)

HSP 1 Score: 100 bits (250), Expect = 1.720e-25
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    1 MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILLREGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGM 96
            MAWR  LSRN++ELR   C  S +SS  R F + NY +LKTLNP FPIL+RE SG  P L A YD GVE+ + L GL+E +I K VE  V+ GA +
Sbjct:    1 MAWRGHLSRNMKELRILLCQTSPASSSARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGVERGIRLEGLTEAQILKAVEDLVKVGASL 96          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4292.10973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C8_ECTSI1.340e-5169.57L51_S25_CI-B8 domain-containing protein n=2 Tax=Ec... [more]
A0A0D6R4M3_ARACU3.550e-2854.55L51_S25_CI-B8 domain-containing protein n=2 Tax=Ar... [more]
W1PFD0_AMBTC2.580e-2755.21L51_S25_CI-B8 domain-containing protein n=1 Tax=Am... [more]
UPI001CC74C302.580e-2754.17NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A5J5APT5_9ASTE1.480e-2656.38L51_S25_CI-B8 domain-containing protein n=1 Tax=Ny... [more]
UPI0001982B0E1.480e-2655.21NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A1R3HLH0_COCAP3.540e-2654.17L51_S25_CI-B8 domain-containing protein n=2 Tax=Co... [more]
A0A3S3MVY3_9MAGN8.530e-2652.08NADH dehydrogenase ubiquinone 1 alpha subcomplex s... [more]
A0A6J0ZVW3_9ROSI1.210e-2553.13NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2I4FC77_JUGRE1.720e-2554.17NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 20..93
e-value: 2.7E-15
score: 66.8
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 28..78
e-value: 2.4E-9
score: 36.9
NoneNo IPR availableGENE3D3.40.30.10coord: 2..94
e-value: 6.3E-27
score: 95.6
NoneNo IPR availablePANTHERPTHR12878:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 2coord: 1..92
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PIRSFPIRSF005822NDUA2coord: 1..101
e-value: 4.4E-29
score: 98.9
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PANTHERPTHR12878NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNITcoord: 1..92
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 10..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4292contigH-paniculata_contig4292:10024..14176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4292.10973.1mRNA_H-paniculata_contig4292.10973.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4292 9983..16174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4292.10973.1 ID=prot_H-paniculata_contig4292.10973.1|Name=mRNA_H-paniculata_contig4292.10973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MAWRASLSRNLRELRFCCCNVSDSSSRVRNFYQSNYAELKTLNPAFPILL
REGSGTSPYLIATYDYGVEQQLPLSGLSEEEIAKQVEVAVENGAGMPRSP
MQPLFRSVPQDVVEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosome/NADH_DH
IPR016464NADH_Ub_cplx-1_asu_su-2
IPR036249Thioredoxin-like_sf