prot_H-paniculata_contig4264.10903.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4264.10903.1
Unique Nameprot_H-paniculata_contig4264.10903.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
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BLAST of mRNA_H-paniculata_contig4264.10903.1 vs. uniprot
Match: D8LLI4_ECTSI (SEN1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI4_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.020e-15
Identity = 41/79 (51.90%), Postives = 49/79 (62.03%), Query Frame = 0 
Query:   10 GVGFPCEGVAELLLRHPEHWWCRYTNAMSEMLLSIDGGLEGDCAHSGQADGRSRGHRATLARGASTAVSLVWQEADAQL 88
            G GFP E VAELLLRHPEHWWCRY +AM+EMLLS+DGG E +    G          +T +  + T V +VWQ    QL
Sbjct:   85 GFGFPFEAVAELLLRHPEHWWCRYPDAMAEMLLSLDGGCESE----GLPYAPVTSDTSTTSSDSLTGVGIVWQTVSLQL 159
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4264.10903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLI4_ECTSI1.020e-1551.90SEN1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4264contigH-paniculata_contig4264:11211..12741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4264.10903.1mRNA_H-paniculata_contig4264.10903.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4264 11201..12741 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4264.10903.1 ID=prot_H-paniculata_contig4264.10903.1|Name=mRNA_H-paniculata_contig4264.10903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
MECTVDDVSGVGFPCEGVAELLLRHPEHWWCRYTNAMSEMLLSIDGGLEG
DCAHSGQADGRSRGHRATLARGASTAVSLVWQEADAQLG
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