prot_H-paniculata_contig42578.10880.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42578.10880.1
Unique Nameprot_H-paniculata_contig42578.10880.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length37
Homology
BLAST of mRNA_H-paniculata_contig42578.10880.1 vs. uniprot
Match: A0A6H5KV09_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV09_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.850e-10
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 KAEPFLGVPQCLPGVIEAESFDVGGLGLGFGDTDPE 36
            +AEPFLG P CLPG I+AE++D GGLGLGFGD+ PE
Sbjct:  275 EAEPFLGAPLCLPGTIQAEAYDTGGLGLGFGDSYPE 310          
BLAST of mRNA_H-paniculata_contig42578.10880.1 vs. uniprot
Match: A0A2N1VUQ0_9BACT (Uncharacterized protein n=1 Tax=Ignavibacteriae bacterium HGW-Ignavibacteriae-2 TaxID=2013809 RepID=A0A2N1VUQ0_9BACT)

HSP 1 Score: 49.3 bits (116), Expect = 1.060e-5
Identity = 18/32 (56.25%), Postives = 27/32 (84.38%), Query Frame = 0
Query:    4 PFLGVPQCLPGVIEAESFDVGGLGLGFGDTDP 35
            P+LGVP  +PG+IEAE++D+GG G+ + D+DP
Sbjct:  376 PYLGVPISVPGLIEAENYDIGGQGIAYNDSDP 407          
BLAST of mRNA_H-paniculata_contig42578.10880.1 vs. uniprot
Match: A0A7Y4QP35_9BACT (Carbohydrate-binding protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7Y4QP35_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 1.440e-5
Identity = 19/31 (61.29%), Postives = 25/31 (80.65%), Query Frame = 0
Query:    4 PFLGVPQCLPGVIEAESFDVGGLGLGFGDTD 34
            PF G+PQ +PG+++AE+FD GG GL F DTD
Sbjct:  975 PFFGLPQTIPGIVQAENFDGGGEGLAFHDTD 1005          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42578.10880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KV09_9PHAE1.850e-1072.22GH16 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A2N1VUQ0_9BACT1.060e-556.25Uncharacterized protein n=1 Tax=Ignavibacteriae ba... [more]
A0A7Y4QP35_9BACT1.440e-561.29Carbohydrate-binding protein n=1 Tax=Verrucomicrob... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42578contigH-paniculata_contig42578:1134..1244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42578.10880.1mRNA_H-paniculata_contig42578.10880.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42578 1134..1244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42578.10880.1 ID=prot_H-paniculata_contig42578.10880.1|Name=mRNA_H-paniculata_contig42578.10880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=37bp
KAEPFLGVPQCLPGVIEAESFDVGGLGLGFGDTDPE*
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