prot_H-paniculata_contig41388.10641.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig41388.10641.1
Unique Nameprot_H-paniculata_contig41388.10641.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length142
Homology
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BLAST of mRNA_H-paniculata_contig41388.10641.1 vs. uniprot
Match: D7FGR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR9_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 5.710e-61
Identity = 97/141 (68.79%), Postives = 117/141 (82.98%), Query Frame = 0 
Query:    2 KEFAERPKNACPAFVARRLTLLLDVSEPNQRYRMLQLLYLRHMIAFHHSGNLLKGTPGQLSTNLDIPEVVVRRLLEKFAVCESRGRGGAGSYSRTKTLKNQLLVHTLCLALVLEGCRLEFETLSQDLKLSTADTRAMIREL 142
            K+FAERP+ +CP FV +RLTLLLD+ E NQ+ RML+LLYLRHM  FHH+  LLKGTP QLS  LDIPE+V+RRLLEKF+VCE +G GG  +Y RTKTLKNQL+VH LCLALVLEGCRLE   L++D +LSTA+ R+M+REL
Sbjct:  292 KDFAERPRESCPHFVGKRLTLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGTANYVRTKTLKNQLVVHALCLALVLEGCRLEIGVLAEDFRLSTAEARSMLREL 432
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41388.10641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGR9_ECTSI5.710e-6168.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009668RNA polymerase I associated factor, A49-likePFAMPF06870RNA_pol_I_A49coord: 5..142
e-value: 2.8E-23
score: 82.4
IPR009668RNA polymerase I associated factor, A49-likePANTHERPTHR14440FAMILY NOT NAMEDcoord: 6..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41388contigH-paniculata_contig41388:810..1394 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41388.10641.1mRNA_H-paniculata_contig41388.10641.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig41388 810..1394 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig41388.10641.1 ID=prot_H-paniculata_contig41388.10641.1|Name=mRNA_H-paniculata_contig41388.10641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp
VKEFAERPKNACPAFVARRLTLLLDVSEPNQRYRMLQLLYLRHMIAFHHS
GNLLKGTPGQLSTNLDIPEVVVRRLLEKFAVCESRGRGGAGSYSRTKTLK
NQLLVHTLCLALVLEGCRLEFETLSQDLKLSTADTRAMIREL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009668RNA_pol-assoc_fac_A49-like