prot_H-paniculata_contig412.10608.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig412.10608.1
Unique Nameprot_H-paniculata_contig412.10608.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length495
Homology
[Close]
BLAST of mRNA_H-paniculata_contig412.10608.1 vs. uniprot
Match: D7G522_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G522_ECTSI)

HSP 1 Score: 678 bits (1749), Expect = 1.090e-241
Identity = 351/462 (75.97%), Postives = 400/462 (86.58%), Query Frame = 0 
Query:   36 MMVNHNEFGITDEEFEENDSEEEKVQELLLKKMCNFITRHPEAAGDDSIKTLSALAVDELLLNANLDTARMLFQPVPFLKFFKAHGVEGVDSRRADLEKAAEKVNETATEQGMLRALKEQIGGECKCLTQFKEGQPLKPPEEDMEDLTYEQSVAAPFLKIPVKKVNALGQDSRLHIEIRRLCAPNDKPPYLCILIAPASRYIFHSFPVEEINADKAFVHILEGIVMAVVTEGMGMIDEAVRIRPANLTTTDPLLAKFLSPLLEGTRVTVAASSDKVVNADADAKTKESPLIAIMDGVFADFNLEIQKENSKRKLPIGDTMAEEVKFKVKSKTASGKEKYVADPVAEERQIPDRMMACRGCNVLHLRSAVKQCSLCNQAWYCTSECQAKDWSAGHKTECSRKNEGKKKGKG--HVSEDSGEDLNDQAQKDALNSFTITKNVP-AGGGAKKKAAGKXKGKGKKK 494
            MMVNHNEFGIT+EEFEE+ ++E  VQ+LLL+KM NFIT+HPEAAGDD+IKTL+ALAVDELLLN NL+ AR++FQPVPFLKFFK HGV G+DSRRADL+KA E+VN  ATE GML AL + +G  CKCLT F  G PLKP EE+ E LTY +S+AAPFLKIPVKK NA GQDSRLH+EIRRL AP+DK PYLCILIAPASRY+FHSFP+EE  ADKAF+H+LEGIVM VVTEGMGMI+EAVRIRPA LTTTDPLLA FLSPLLEGTRV+VAASSDKVVNAD+DAKTKESPLIAIMDGV+ADF +++ K NSKRKLPIGD M++E  FKVKS+TASGKEKY+ADP  E+R+IP++MMAC+GCN L LRS VKQCSLCN+ WYC +ECQA DWS GHK +CSRKNEGKKKGKG  HVSEDSG+DL DQA KDAL+SF I  +    GGGAKKKA+GKX GKGKKK
Sbjct:    1 MMVNHNEFGITEEEFEEHGNDEAAVQDLLLQKMKNFITKHPEAAGDDAIKTLTALAVDELLLNGNLENARLVFQPVPFLKFFKEHGVAGIDSRRADLDKATEEVNAVATEAGMLEALTKAVGSNCKCLTLFTPGNPLKPQEEEPEGLTYAESLAAPFLKIPVKKTNATGQDSRLHVEIRRLPAPHDKAPYLCILIAPASRYVFHSFPIEETQADKAFMHVLEGIVMGVVTEGMGMIEEAVRIRPAQLTTTDPLLANFLSPLLEGTRVSVAASSDKVVNADSDAKTKESPLIAIMDGVYADFFIDLTKANSKRKLPIGDNMSDEAAFKVKSRTASGKEKYIADPEKEKRKIPEKMMACKGCNQLKLRSQVKQCSLCNEVWYCGNECQASDWSKGHKNDCSRKNEGKKKGKGAGHVSEDSGDDLGDQAAKDALDSFAIDLHKGLGGGGAKKKASGKXXGKGKKK 462
[Close]
BLAST of mRNA_H-paniculata_contig412.10608.1 vs. uniprot
Match: A0A6H5KRE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRE4_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 3.980e-106
Identity = 165/207 (79.71%), Postives = 184/207 (88.89%), Query Frame = 0 
Query:  130 ADLEKAAEKVNETATEQGMLRALKEQIGGECKCLTQFKEGQPLKPPEEDMEDLTYEQSVAAPFLKIPVKKVNALGQDSRLHIEIRRLCAPNDKPPYLCILIAPASRYIFHSFPVEEINADKAFVHILEGIVMAVVTEGMGMIDEAVRIRPANLTTTDPLLAKFLSPLLEGTRVTVAASSDKVVNADADAKTKESPLIAIMDGVFADF 336
            ADL+KAAE+VN  ATE GML AL + +G +C CLT F  G PLKP EE+ E LTY +S+AAPFLKIPVKK NA+GQDSRLH+EIRRL AP+DK PYLCILIAPASRY+FHSFP+EE  ADKAF+H+LEGIVM VVTEGMGMI+EAVRIRPA LTTTDPLLAKFLSPLLEGTRV+VAASSDKVVNAD+DAKTKESPLIAIMDGV+ADF
Sbjct:    6 ADLDKAAEEVNAVATEAGMLEALTKAVGSKCNCLTLFTPGNPLKPQEEEPEGLTYAESLAAPFLKIPVKKTNAVGQDSRLHVEIRRLPAPHDKAPYLCILIAPASRYVFHSFPIEETQADKAFMHVLEGIVMGVVTEGMGMIEEAVRIRPAQLTTTDPLLAKFLSPLLEGTRVSVAASSDKVVNADSDAKTKESPLIAIMDGVYADF 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig412.10608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G522_ECTSI1.090e-24175.97MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KRE4_9PHAE3.980e-10679.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availableGENE3D3.30.60.180coord: 380..440
e-value: 3.1E-10
score: 41.6
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 390..435
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 392..433
e-value: 3.0E-8
score: 33.6
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 392..433
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 392..433
score: 11.689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig412contigH-paniculata_contig412:4182..20569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig412.10608.1mRNA_H-paniculata_contig412.10608.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig412 3486..23378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig412.10608.1 ID=prot_H-paniculata_contig412.10608.1|Name=mRNA_H-paniculata_contig412.10608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=495bp
MPPKKGARTTGNVADPTLCRHGGPRATSHILECINMMVNHNEFGITDEEF
EENDSEEEKVQELLLKKMCNFITRHPEAAGDDSIKTLSALAVDELLLNAN
LDTARMLFQPVPFLKFFKAHGVEGVDSRRADLEKAAEKVNETATEQGMLR
ALKEQIGGECKCLTQFKEGQPLKPPEEDMEDLTYEQSVAAPFLKIPVKKV
NALGQDSRLHIEIRRLCAPNDKPPYLCILIAPASRYIFHSFPVEEINADK
AFVHILEGIVMAVVTEGMGMIDEAVRIRPANLTTTDPLLAKFLSPLLEGT
RVTVAASSDKVVNADADAKTKESPLIAIMDGVFADFNLEIQKENSKRKLP
IGDTMAEEVKFKVKSKTASGKEKYVADPVAEERQIPDRMMACRGCNVLHL
RSAVKQCSLCNQAWYCTSECQAKDWSAGHKTECSRKNEGKKKGKGHVSED
SGEDLNDQAQKDALNSFTITKNVPAGGGAKKKAAGKKKGKGKKK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND