prot_H-paniculata_contig4106.10579.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4106.10579.1
Unique Nameprot_H-paniculata_contig4106.10579.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length412
Homology
BLAST of mRNA_H-paniculata_contig4106.10579.1 vs. uniprot
Match: A0A6H5JFK6_9PHAE (START domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFK6_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 7.570e-136
Identity = 218/393 (55.47%), Postives = 272/393 (69.21%), Query Frame = 0
Query:   20 GKPDPGLQYLREVTLTSEEQQELETTARSNVPGLLVMESGGTKEGWKSVATLFGVKVCSKPT--EGDTMRVICRGQTQLPVEVTMDIIKGQFIQAYNNSRMLAQQMRSSDPMSRETKIIAQVPCGEEEFIRIVWGSFAATGVAWARDFCFLQHATAATDPNTQERLFVVVAGSVERPEVPDMEKLCKRIRSTVETSGYVFREAADGS-IRATYVVDVNPNGWLPTKIVNTVSINQALNVSRVRRNFILAAEALTAMELEAPVFSTDIGWRGTYSQLVKRPASGAAPLAVRVKFWANGKVWFKIRGAGAGAVTDWKPATASETFGAGRWASYGKNKAVSVEFMLQPCEGSSNES-----AAPASEVHGDGDVGACVLEWKAGGWFSGLSVYHAV 404
            GK DPGL++LRE+ LT EE     + AR  +P L+  E+  + EGWK  +TLFGVKV S+P   + D+  VICRGQ  L  +VT +++K QF+  +N S +LAQQMR+SDPMSRETKI+ Q+PC E E IRI WGSF A GVAWARDFCFLQHA A+TDP T ERLF VV+GS+ERPEVPDMEKLCKRIRSTV+TSG VFRE  DG  +RATYVV+VNPNGW+P+KIVN +  NQA+NVSRV+      A+AL A+++EAP+F   IGWR T+   ++RPA G+A   V VKF A  KV F++ GA A A TDW PA AS   GAG   +Y  +   ++ F L+P   S N +     A  AS+V  +    + VLEWK  GWF GL +YH V
Sbjct:   73 GKQDPGLKFLREIQLTPEEDARYASLARGWIPDLVGFEA--SDEGWKLSSTLFGVKVWSRPNPDDSDSSLVICRGQIPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVPDMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNIICTNQAMNVSRVKNKLHETAKALAALKIEAPIFPKAIGWRQTHEFPLRRPAPGSAASTVSVKFSATSKVTFRVVGATA-ATTDWAPAEASTGVGAGETVTYPADTPTTMTFKLRPEAASGNGARRGGGAVGASDVELEEAKSSVVLEWKGAGWFGGLVIYHLV 462          
BLAST of mRNA_H-paniculata_contig4106.10579.1 vs. uniprot
Match: A0A7R9YNF4_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNF4_DIALT)

HSP 1 Score: 82.8 bits (203), Expect = 1.200e-13
Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 0
Query:  126 SDPMSRETKIIAQVPCGEEEFIRIVWGSFAATGVAWARDFCFLQHATAATDPNTQERLFVVVAGSVERPEVPDMEKLCKRIRSTVETSGYVFREAADGSIR--ATYVVDVNPNGWLPTKIVNTVSINQALNVSRVR 259
            +D   R   +  ++P G+ +   + W  FAA      RDFC+L+H + A  P+   RLF  +  SV+R E PDM +    +R+ + ++GYVFR++A+GS      YVV ++P G +P  +VN V+ +QA N + +R
Sbjct:  228 ADEAVRPAPVAGEMPPGKAQ---VEWACFAAPPPLAPRDFCWLEHTSFARAPDGS-RLFFSLCSSVQREEAPDMWQSHGYVRAELTSTGYVFRQSAEGSDDWDLFYVVQIDPKGIVPKWVVNLVATDQAANAAAMR 359          
BLAST of mRNA_H-paniculata_contig4106.10579.1 vs. uniprot
Match: A0A8J5XZB1_DIALT (START domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZB1_DIALT)

HSP 1 Score: 82.8 bits (203), Expect = 2.100e-13
Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 0
Query:  126 SDPMSRETKIIAQVPCGEEEFIRIVWGSFAATGVAWARDFCFLQHATAATDPNTQERLFVVVAGSVERPEVPDMEKLCKRIRSTVETSGYVFREAADGSIR--ATYVVDVNPNGWLPTKIVNTVSINQALNVSRVR 259
            +D   R   +  ++P G+ +   + W  FAA      RDFC+L+H + A  P+   RLF  +  SV+R E PDM +    +R+ + ++GYVFR++A+GS      YVV ++P G +P  +VN V+ +QA N + +R
Sbjct:  226 ADEAVRPAPVAGEMPPGKAQ---VEWACFAAPPPLAPRDFCWLEHTSFARAPDGS-RLFFSLCSSVQREEAPDMWQSHGYVRAELTSTGYVFRQSAEGSDDWDLFYVVQIDPKGIVPKWVVNLVATDQAANAAAMR 357          
BLAST of mRNA_H-paniculata_contig4106.10579.1 vs. uniprot
Match: L8H5Y9_ACACA (START domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5Y9_ACACA)

HSP 1 Score: 65.5 bits (158), Expect = 4.930e-8
Identity = 43/129 (33.33%), Postives = 72/129 (55.81%), Query Frame = 0
Query:  147 IRIVWGSFAATGVAWARDFCFLQHATAATDPNTQERLFVVVAGSVERPEVPDMEKLCKRIRSTVETSGYVFR----EAADGSIRA--TYVVDVNPNGWLPTKIVNTVSINQALNVSRVRRNFILAAEAL 269
            +R+    F+A     +RDF  +     A +  T + LFV V  S+ER ++P  E     +R  +++SG+V +    +   G  R   TY+V +NP GW+PT +VNTV+++Q L ++ ++ N IL  EA+
Sbjct:  137 VRVCNYKFSAPWPVASRDFVII-----AGEKITDDGLFVTVVNSIERDDIPVEEGF---VRGMLKSSGFVIKPLDNDPVTGKPRCEITYLVQLNPMGWIPTIVVNTVNVSQPLCINTLK-NAILLTEAM 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4106.10579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JFK6_9PHAE7.570e-13655.47START domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7R9YNF4_DIALT1.200e-1335.29Hypothetical protein (Fragment) n=1 Tax=Diacronema... [more]
A0A8J5XZB1_DIALT2.100e-1335.29START domain-containing protein n=1 Tax=Diacronema... [more]
L8H5Y9_ACACA4.930e-833.33START domain containing protein n=1 Tax=Acanthamoe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 64..266
e-value: 5.3E-23
score: 83.8
IPR002913START domainPFAMPF01852STARTcoord: 125..259
e-value: 3.4E-9
score: 36.4
IPR002913START domainPROSITEPS50848STARTcoord: 36..246
score: 15.121
NoneNo IPR availablePANTHERPTHR19308PHOSPHATIDYLCHOLINE TRANSFER PROTEINcoord: 47..251
NoneNo IPR availablePANTHERPTHR19308:SF14coord: 47..251
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 57..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4106contigH-paniculata_contig4106:2330..14573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4106.10579.1mRNA_H-paniculata_contig4106.10579.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4106 2..14598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4106.10579.1 ID=prot_H-paniculata_contig4106.10579.1|Name=mRNA_H-paniculata_contig4106.10579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=412bp
MGDVPGPSSEDKKAQAAAIGKPDPGLQYLREVTLTSEEQQELETTARSNV
PGLLVMESGGTKEGWKSVATLFGVKVCSKPTEGDTMRVICRGQTQLPVEV
TMDIIKGQFIQAYNNSRMLAQQMRSSDPMSRETKIIAQVPCGEEEFIRIV
WGSFAATGVAWARDFCFLQHATAATDPNTQERLFVVVAGSVERPEVPDME
KLCKRIRSTVETSGYVFREAADGSIRATYVVDVNPNGWLPTKIVNTVSIN
QALNVSRVRRNFILAAEALTAMELEAPVFSTDIGWRGTYSQLVKRPASGA
APLAVRVKFWANGKVWFKIRGAGAGAVTDWKPATASETFGAGRWASYGKN
KAVSVEFMLQPCEGSSNESAAPASEVHGDGDVGACVLEWKAGGWFSGLSV
YHAVTPSPDYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR002913START_lipid-bd_dom