prot_H-paniculata_contig410.10563.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig410.10563.1
Unique Name	prot_H-paniculata_contig410.10563.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	115

Homology

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BLAST of mRNA_H-paniculata_contig410.10563.1 vs. uniprot
Match: D8LF73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF73_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.120e-18
Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 0

Query:    2 KTRARARRLDQAARKKEEACRDARLAELDKTDGATTFSLKAMEPMKLSADNGNLNLLAQGGGGSDPTLARLSAPLPHLTRHPGRPPSLEAHQ 93
            K  ARA ++D A  KKE A RDAR+AELD  D + TF++KAM+PMK+S DN +L++L   G G   +LARLSAPLPHLT HPGRPP ++  +
Sbjct:  555 KAEARAAKIDAAKLKKETAARDARMAELDLQDSSKTFTVKAMDPMKISQDN-DLHMLPDLGEGPL-SLARLSAPLPHLTPHPGRPPCIQPQE 644

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BLAST of mRNA_H-paniculata_contig410.10563.1 vs. uniprot
Match: A0A6H5L7C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7C1_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.390e-17
Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 0

Query:    2 KTRARARRLDQAARKKEEACRDARLAELDKTDGATTFSLKAMEPMKLSADNGNLNLLAQGGGGSDPTLARLSAPLPHLTRHPGRPPSLEAHQ 93
            K +ARA ++D A  +KE A RD R+AELD  D + TF++KAM+PMK S DN +L++L   G G   +LARLSAPLPHLT HPGRPP ++  +
Sbjct:  330 KAKARAAKIDAAKLQKETAARDGRMAELDLQDSSKTFTVKAMDPMKTSQDN-DLHMLPDLGEGPL-SLARLSAPLPHLTLHPGRPPCIQPQE 419

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig410.10563.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig410.10563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LF73_ECTSI	2.120e-18	56.52	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L7C1_9PHAE	3.390e-17	54.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 10..30

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig410	contig	H-paniculata_contig410:221..1288 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig410.10563.1	mRNA_H-paniculata_contig410.10563.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig410 2..1369 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig410.10563.1 ID=prot_H-paniculata_contig410.10563.1|Name=mRNA_H-paniculata_contig410.10563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MKTRARARRLDQAARKKEEACRDARLAELDKTDGATTFSLKAMEPMKLSA
DNGNLNLLAQGGGGSDPTLARLSAPLPHLTRHPGRPPSLEAHQARFVDSC
FTKHAVMRAFALTG*