prot_H-paniculata_contig4087.10545.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4087.10545.1
Unique Nameprot_H-paniculata_contig4087.10545.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length389
Homology
BLAST of mRNA_H-paniculata_contig4087.10545.1 vs. uniprot
Match: A0A6H5KUF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF6_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 3.010e-37
Identity = 103/334 (30.84%), Postives = 162/334 (48.50%), Query Frame = 0
Query:   67 ACTVEQLVGHSGAHQPGG----------WVIATNETRPSYGCSCPYFKARYFCPHLSEKQHHYVWQPHSVAGGECTPTAVTLLMEDLFPPGFTTFIFGNSHLRQPMEALMCQFSDQIVTRNASVMTSSGE--SKQQLIGLDEQCRGF--SHQGHDDLL-NKCFDAQTSF-LLRCSDDMASFQFRNGASLHYRFSDQTLHHKDIDNEIAYMGLNPDKVDVVIANMGNGEIIPFSSLSKSARRMQESGKLILWLSTFYN-GRVGIYAGPRGKALADLGVVQFDFSMMMRDSLQAVKELSCKVVENRSQDTHYCMPGPPDELGILLARMVWAHFVQQ 383
            ACTV+ LV   G ++ GG          W   ++   P + C+C   KA YFCP+L    +     P     G C     + L  +  PP F    +GNSHLRQ +E ++C +S  I +R   V+   G    +  L+  D QCRG   SH+  + LL ++C   +       C D+ + F+F NGA++HY F+ +   +K  ++ + Y G      DVV+ N+GN   +  S + + A  ++E G  + W S +   G VG +         D G        M+    +++K L+  VVE  + + H+CMPGPP+E+GILL  M WA + ++
Sbjct:   92 ACTVDDLVPPHGNYEDGGGDGGYDLSGMWD-KSSMVAPPFDCTCRTLKASYFCPNLGTGGY-----PKWNTSGACERRERSALQNEPLPPAFRVLFYGNSHLRQVVEGIVCAYSTSIRSRCLRVVVGGGSLAPEDALVDEDLQCRGCVNSHKQRNMLLEHECISEEAKKEACSCDDNESVFEFDNGAAIHYHFAHKE-ENKRFEDALKYRGTEYSFYDVVVGNLGNDPRMEVSEVLRVANLLKEEGVTLFWTSAYEGEGDVGAWLPEEQALFWDSGARFVPVHRMV----ESLKYLTKGVVEGEN-NPHFCMPGPPNEIGILLLEMAWAVYAER 413          
BLAST of mRNA_H-paniculata_contig4087.10545.1 vs. uniprot
Match: D7G2P7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P7_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 8.490e-32
Identity = 97/306 (31.70%), Postives = 149/306 (48.69%), Query Frame = 0
Query:   94 PSYGCSCP-------YFKARYFCPHLSEKQHHYVWQPHSVAGGECTPTAVTLLMEDLFPPGFTTFIFGNSHLRQPMEALMCQFSDQIVTRNASVMTSSGESKQQ---LIGLDEQCRG--FSHQGHDDLL-NKCF--DAQTSFLLRCSDDMASFQFRNGASLHYRFSDQTLHHKDIDNEIAYMGLNPDKVDVVIANMGNGEIIPFSSLSKSARRMQESGKLILWLSTFYN-GRVGIYAGPRGKALADLGVVQFDFSMMMRDSLQAVKELSCKVVENRSQDTHYCMPGPPDELGILLARMVWAHFVQQ 383
            P + C+C           A YFCP+L    +     P     G C     + L  +  PPGF    +GNSHLRQ +E ++C +S  I +R   V+   GES  Q   L+  D QCR   +S +    LL ++C   DA+     RC DD + F+F NGA++HY F+ +   +K  ++ + Y G      D V+ N+GN   +  S + + A  ++E G  + W S +   G VG +         D G        M++    ++K L+  VVE  + + H+CMPGPP+E+GILL  M WA + ++
Sbjct:  125 PPFDCTCSGSGRAGRALNASYFCPNLGTGGY-----PKWSTSGGCERRERSALQNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSRCLRVVVD-GESLAQEDTLVDEDLQCRSCVYSRKLRRTLLEHECISEDAKEE-ACRCDDDESVFEFDNGAAIHYHFAHKE-ENKRFEDALQYRGTEYSSYDAVVGNLGNDPRMEVSEVLRVANLLKEEGVPLFWTSAYEGEGDVGAWLPEEQALFWDSGARFVPVHRMVK----SLKYLTKGVVEGEN-NPHFCMPGPPNEIGILLLEMAWAVYAER 417          
BLAST of mRNA_H-paniculata_contig4087.10545.1 vs. uniprot
Match: A0A6H5KAG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG2_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.110e-24
Identity = 98/335 (29.25%), Postives = 147/335 (43.88%), Query Frame = 0
Query:   68 CTVEQLVG-----HSGAH------QPGGWVIATNETRPSYGCSCPYFKARYFCPHLSEKQHHYVWQPHSVAGGEC-TPTAVTLLMEDL-FPPGFTTFIFGNSHLRQPMEALMCQFSDQIVTRNASVM--TSSGESKQQLIGLDEQCRGFSHQGH--DDLLNK-CFDAQTSFLLRCSDDMASFQFR-----NGASLHYRFSDQTLHHKDIDNEIAYMGLNPDKVDVVIANMGNGEIIPFSSLSKSARRMQESGKLILWLSTFYNGRVGIYAGPRGKALADLGVVQFDFSMMMRDSLQAVKELSCKVVENRSQ-DTHYCMPGPPDELGILLARMVWA 378
            CTV++L+      HS         Q G W       +P YGC C + KARYFCP+L    +   W P +V  G+C + T   +      FPP      +GNSH+RQ +EA++C F   +V++    +  T++ E+    +  D  CR  S      D LLN  C                          NGA +H+ F++     +  D    +   +      V AN GN   +   ++  +A  +Q +G    WLST Y G+         +   D       F  +  D +Q +  L+ KVVE   + D H+CMPGPPDE+GILL +++WA
Sbjct:  122 CTVDELLPLKKSPHSALSSEWSQGQGGVW-------KPPYGCDCAFSKARYFCPNLGSGVYPR-WVPRAVTRGDCRSATREEMSSRGAPFPPDSKVLFYGNSHMRQTLEAILCLFQKDVVSKRLRFVSATNANETAYLEVPGDTPCRACSVWTFFKDTLLNSGCIGXXXXXXXXXXXXXXXXXXXXXXXSNGAVVHFYFANHDEDKRITDALAPHHKEDLSYYTAVFANPGNKPSVEADAVLDAAVELQAAGVPFFWLST-YEGKGDPQRWNSRQRETDFWESGAKFVRVF-DIVQGLHSLTRKVVERTVENDPHFCMPGPPDEVGILLLKLLWA 446          
BLAST of mRNA_H-paniculata_contig4087.10545.1 vs. uniprot
Match: A0A6V1L833_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1L833_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 1.210e-18
Identity = 94/337 (27.89%), Postives = 149/337 (44.21%), Query Frame = 0
Query:   66 PACTVEQLVGHSGAHQPGGWVIATN---ETRPSYG-CSCPYFKARYFCPHLSEKQHHYVWQPHSVAGGECTPTAVTLLMEDLFPPGFTTFIFGNSHLRQPMEALMCQFSDQIVTRNASVMTSSGESKQQ------LIGLDEQCRG----FSHQGHDDLLNKCFDAQ---TSFLLRCSDDMASFQFRNGASLHYRFSDQTLHHKDIDNEIAYM-----GLNP-DKVDVVIAN--MGNGEIIPFSSLSKSARRMQESGKLILWLSTFYNGRVGIYAGPRGKALADLGVVQFDFSMMMRDSLQAVKELSCKVVENRSQDTHYCMPGPPDELGILLARMVW 377
            P CT  QL+        G W+         +P+Y  CSCP+ K RY C H  + Q +++  P ++  G C    V  L E+  P G  T +FGNS+LRQ MEA++C FSD I ++   V+   G ++Q+       +G  E CRG    F+ Q     L  C D+Q   T  +  C D++    F+NGA LH+ +S         ++ I Y+     G+N     DV++ N    N        + K    +      + W     N     Y   +   LA    V   F   + +  Q  + +  K+++  + D H+C+PG PD++ I L   ++
Sbjct:   81 PICTGNQLIE-------GRWICDATFPWYQKPTYSLCSCPHAKGRYHC-HGKDLQAYFL--PTAIEKGLCRWHTVEYLKENPLPAGSKTLLFGNSYLRQLMEAVLCMFSDSIASKEV-VLQEEGITRQRGKYPMVEVGQTE-CRGGPWEFNAQH---FLYDCPDSQKNQTPNVTECYDNLMKVSFKNGAELHFIYS--------FESTIPYIPKQLPGVNSLQYFDVIMTNGVYANRMKAETFVMVKEKNGLDGKSPRLFWAGLNEND----YENAKDLFLASKIEV---FKAHIINRSQCSRRVG-KILQQDAGDRHFCLPGVPDDVAISLLHFIY 386          
BLAST of mRNA_H-paniculata_contig4087.10545.1 vs. uniprot
Match: A0A6H5L5J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J2_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.270e-16
Identity = 60/222 (27.03%), Postives = 101/222 (45.50%), Query Frame = 0
Query:  166 MCQFSDQIVTRNASVMTSSGESKQQLIGLDEQCRGFSHQGHDDLLNKCFDAQT-SFLLRCSDDMASFQFRNGASLHYRFSDQTLHHKDIDNEIAYMGLNPDKVDVVIANMGNGEIIPFSSLSKSARRMQESGKLILWLSTFYN-GRVGIYAGPR-------GKALADLGVVQFDFSMMMRDSLQAVKELSCKVVENRSQDTHYCMPGPPDELGILLARMVWA 378
            MC + +++V + A+     G    + I  + QCR  +      +   C D        RC DD A F F+NGA +HY F+    +    D  + +  ++    D V+AN GNG  +    + ++A  +Q      LWLST+   G V ++   +       G    ++G + F  S   + +++               D H+C+PGPPDELG+LL +++WA
Sbjct:    1 MCIYWNKVVAKRATYQ-QPGNGVDRWIHGNAQCRACTGLQQQQVNYGCLDQDVRDDACRCDDDHAEFLFQNGAVVHYYFASTDPNKSIKDALLPHGNVSLSYYDAVVANNGNGPEMAVDVVCEAALELQALSVPFLWLSTYVGRGSVDLWNDAQQEQFTQSGARFVNVGHMMFGLSNFTKGAVEG------------GNDPHFCLPGPPDELGLLLLKIIWA 209          
BLAST of mRNA_H-paniculata_contig4087.10545.1 vs. uniprot
Match: D7G974_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G974_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 2.810e-14
Identity = 57/163 (34.97%), Postives = 81/163 (49.69%), Query Frame = 0
Query:  222 LRCSDDMASFQFRNGASLHYRFSDQTLHHKDIDNEIAYMGLNPDKVD-----VVIANMGNGEIIPFSSLSKSARRMQESGKLILWLSTFYNGRVGIYAGPRGKALADLGVVQFDFSMMMRDSLQAVKELSCKVVENRSQDT-HYCMPGPPDELGILLARMVWA 378
            LRC DD   F F NGA +H+ F++     +D D  I       DK D      V AN GN   +   ++  +A  +Q +G    WLST Y G+         +   D       F  ++ D +Q +  L+ KVVE   +D  H+CMPGPPDE+GILL +++WA
Sbjct:   25 LRCDDDHGEFFFSNGAVVHFYFAN-----RDEDKRITDALAPHDKEDFSYYTAVFANPGNKPSVEADAVLDAAFELQAAGVPFFWLST-YEGKGDPQRWNSPQRETDFPGSGAKFVRVV-DMVQGLHRLTRKVVERTVEDDPHFCMPGPPDEVGILLLKLLWA 180          
BLAST of mRNA_H-paniculata_contig4087.10545.1 vs. uniprot
Match: A0A6H5LBA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA5_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.300e-13
Identity = 63/223 (28.25%), Postives = 102/223 (45.74%), Query Frame = 0
Query:  166 MCQFSDQIVTRNASVMTSSGESKQQLIGLDEQCR---GFSHQGHDDLLNKCFDAQT-SFLLRCSDDMASFQFRNGASLHYRFSDQTLHHKDIDNEIAYMGLNPDKVDVVIANMGNGEIIPFSSLSKSARRMQESGKLILWLSTFY-NGRVGIYAGPRGKALADLGVVQFDFSMMMRDSLQAVKELSCKVVENRSQDTHYCMPGPPDELGILLARMVWAHFVQQ 383
            MC   +++V +  +     G    + I  + QCR   GF  Q  D     C D        RC DD A + F+NGA +HY F+         D  + +  ++    D V AN GN   +    + ++A  +Q      LWLST+  +G V ++   + +  +  G    +   M    L  +   +   VE+R  D H+C+PGPPDELG LL +++WA + ++
Sbjct:    1 MCIHWNKVVAKRVTYQ-QPGNGVDRWIHGNAQCRACTGFDQQQVD---YGCLDQDVRDDACRCDDDHAEYLFQNGAVVHYYFAGTDPKKSIKDALLPHGNVSLSHYDAVFANDGNWPKMAVDDVCEAAFELQALSVPFLWLSTYDGHGSVDLWNDAQKEKFSQSGARFVNVGHM----LFGLSNFTKGAVEDRV-DPHFCLPGPPDELGFLLLKIIWALYQER 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4087.10545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KUF6_9PHAE3.010e-3730.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2P7_ECTSI8.490e-3231.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAG2_9PHAE1.110e-2429.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1L833_HETAK1.210e-1827.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5L5J2_9PHAE1.270e-1627.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G974_ECTSI2.810e-1434.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LBA5_9PHAE1.300e-1328.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..388
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 85..120
score: 8.048

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4087contigH-paniculata_contig4087:3031..14484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4087.10545.1mRNA_H-paniculata_contig4087.10545.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4087 1990..14655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4087.10545.1 ID=prot_H-paniculata_contig4087.10545.1|Name=mRNA_H-paniculata_contig4087.10545.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=389bp
MNSRLDGTGAGGSRRLLLSVSWGISRFAASLAWFFFSATMFCRRGQSVAA
VGDRNEPQMAVNNEPPACTVEQLVGHSGAHQPGGWVIATNETRPSYGCSC
PYFKARYFCPHLSEKQHHYVWQPHSVAGGECTPTAVTLLMEDLFPPGFTT
FIFGNSHLRQPMEALMCQFSDQIVTRNASVMTSSGESKQQLIGLDEQCRG
FSHQGHDDLLNKCFDAQTSFLLRCSDDMASFQFRNGASLHYRFSDQTLHH
KDIDNEIAYMGLNPDKVDVVIANMGNGEIIPFSSLSKSARRMQESGKLIL
WLSTFYNGRVGIYAGPRGKALADLGVVQFDFSMMMRDSLQAVKELSCKVV
ENRSQDTHYCMPGPPDELGILLARMVWAHFVQQQKVSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM